RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 RPL8P62917 257 aaKnown RBP9.25□□□□□ -0.93
SRP54-213ENST00000556994 CD69Q07108 199 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 C2orf83Q53S99 150 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 SPACA3Q8IXA5 215 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 ADTRPQ96IZ2 230 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 DNAJC4Q9NNZ3 241 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 ZFP30Q9Y2G7 519 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 ZNF257Q9Y2Q1 563 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 AMMECR1Q9Y4X0 333 aaPredicted RBP9.25□□□□□ -0.93
SRP54-213ENST00000556994 ROS1P08922 2347 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 CORTO00230 105 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 ITGB1BP1O14713 200 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 HINT1P49773 126 aaPredicted RBP9.25□□□□□ -0.93
SRP54-213ENST00000556994 GNG5P63218 68 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 POU2AF1Q16633 256 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 C21orf62-AS1Q17RA5 79 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 RTL8BQ17RB0 113 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 NUP35Q8NFH5 326 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 GAFA1Q96PS6 74 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 LAMTOR2Q9Y2Q5 125 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 LINC00614P0C842 121 aa9.24□□□□□ -0.93
SRP54-213ENST00000556994 CD24P25063 80 aa9.24□□□□□ -0.93
SRP54-213ENST00000556994 Q56UQ5 140 aa9.24□□□□□ -0.93
SRP54-213ENST00000556994 SEM1Q6ZVN7 128 aa9.24□□□□□ -0.93
SRP54-213ENST00000556994 SARAFQ96BY9 339 aa9.24□□□□□ -0.93
SRP54-213ENST00000556994 KALRNO60229 2985 aa9.24□□□□□ -0.93
SRP54-213ENST00000556994 PSMB11A5LHX3 300 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 HSBP1O75506 76 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 COX19Q49B96 90 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 C10orf55Q5SWW7 151 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 PATE2Q6UY27 113 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
SRP54-213ENST00000556994 RPRMLQ8N4K4 120 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 HARBI1Q96MB7 349 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 MRPL20Q9BYC9 149 aaKnown RBP9.23□□□□□ -0.93
SRP54-213ENST00000556994 COMMD5Q9GZQ3 224 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 RNF7Q9UBF6 113 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 MGAQ8IWI9 3026 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 M0R2Z0 102 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 COX7A2P2O60397 106 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 SFTPCP11686 197 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 SELENOVP59797 346 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 TBR1Q16650 682 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 STUMQ69YW2 141 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 EBLN2Q6P2I7 272 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 RNASEKQ6P5S7 137 aaKnown RBP9.23□□□□□ -0.93
SRP54-213ENST00000556994 KIR3DL3Q8N743 410 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 OR1L8Q8NGR8 309 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 NPIPB3Q92617 1050 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 GUCD1Q96NT3 240 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 PAXXQ9BUH6 204 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 C19orf24Q9BVV8 132 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 FNDC4Q9H6D8 234 aaPredicted RBP9.23□□□□□ -0.93
SRP54-213ENST00000556994 RPH3ALQ9UNE2 315 aa9.23□□□□□ -0.93
SRP54-213ENST00000556994 HIGD1CA8MV81 97 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 VWC2LB2RUY7 222 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 TNFAIP6P98066 277 aaPredicted RBP9.22□□□□□ -0.93
SRP54-213ENST00000556994 PMCHL1Q16048 86 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 ZNF474Q6S9Z5 364 aaPredicted RBP9.22□□□□□ -0.93
SRP54-213ENST00000556994 ZNF841Q6ZN19 808 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 C19orf35Q6ZS72 473 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 ZNF329Q86UD4 541 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 PNKDQ8N490 385 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 RAB9BQ9NP90 201 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 MRPL36Q9P0J6 103 aaKnown RBP9.22□□□□□ -0.93
SRP54-213ENST00000556994 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 RPUSD1Q9UJJ7 312 aaKnown RBP9.22□□□□□ -0.93
SRP54-213ENST00000556994 MAP1BP46821 2468 aaKnown RBP9.22□□□□□ -0.93
SRP54-213ENST00000556994 DMXL1Q9Y485 3027 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 PEX7O00628 323 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 REG1AP05451 166 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 GLRXP35754 106 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 DIAPH2-AS1Q14236 149 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 C10orf113Q5VZT2 155 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 RUSC1-AS1Q66K80 236 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 C22orf34Q6ZV56 151 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 OR5B3Q8NH48 314 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 FAM222BQ8WU58 562 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 BLNKQ8WV28 456 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 MBD6Q96DN6 1003 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 NDUFA4L2Q9NRX3 87 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 BET1LQ9NYM9 111 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 DYSFO75923 2080 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 ADGRG4Q8IZF6 3080 aa9.22□□□□□ -0.93
SRP54-213ENST00000556994 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 SH2D7A6NKC9 451 aaPredicted RBP9.21□□□□□ -0.93
SRP54-213ENST00000556994 M0QZ24 198 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 DLL1O00548 723 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 IGHV1-46P01743 117 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 CRYABP02511 175 aaKnown RBP9.21□□□□□ -0.93
SRP54-213ENST00000556994 SP9P0CG40 484 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 CCL3L1P16619 93 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 TSPOP30536 169 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 ERHP84090 104 aaKnown RBP9.21□□□□□ -0.93
SRP54-213ENST00000556994 WT1-ASQ06250 92 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 UNQ5815/PRO19632Q6UWF5 114 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 SPATA12Q7Z6I5 190 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 ZCCHC24Q8N2G6 241 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms