RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TXNL4BQ9NX01 149 aaKnown RBP3.48□□□□□ -1.85
ATXN3-239ENST00000556315 SDHAF2Q9NX18 166 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 BABAM2Q9NXR7 383 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 RDH8Q9NYR8 311 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 TBC1D24Q9ULP9 559 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 S4R3C0 116 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 V9GYH0 126 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 DEFB131BA0A096LNP1 70 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 A0A1W2PPK0 400 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 TRDCB7Z8K6 153 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 FAM90A26D6RGX4 464 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 K7EMT4 169 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 CTDSP2O14595 271 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 RGS5O15539 181 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 CRYZL1O95825 349 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 CA1P00915 261 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 C1QBP02746 253 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 AMBPP02760 352 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 CTSDP07339 412 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 LIMS3P0CW19 117 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 LIMS4P0CW20 117 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 RBMY1A1P0DJD3 496 aaKnown RBP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 RBMY1CP0DJD4 496 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 DEFA4P12838 97 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 MIFP14174 115 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 M6PRP20645 277 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 MYL9P24844 172 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 HTR2CP28335 458 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 MAS1LP35410 378 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 MFAP4P55083 255 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 TAS2R43P59537 309 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 GNG2P59768 71 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 RPS11P62280 158 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 RPS27AP62979 156 aaKnown RBP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 HLA-DRB3P79483 266 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 MRPS15P82914 257 aaKnown RBP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 IFITM2Q01629 132 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 RBMY1FQ15415 496 aaKnown RBP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 LIPKQ5VXJ0 399 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 IDO2Q6ZQW0 420 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 Q6ZTC4 211 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 CEACAM19Q7Z692 300 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 NRARPQ7Z6K4 114 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 NKAIN3Q8N8D7 197 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 Q8NAQ8 132 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 OR52I1Q8NGK6 324 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF502Q8TBZ5 544 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 ENKURQ8TC29 256 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 DEDD2Q8WXF8 326 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 SMIM19Q96E16 107 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 DIRAS2Q96HU8 199 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 HYLS1Q96M11 299 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 MARVELD1Q9BSK0 173 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 TM2D1Q9BX74 207 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 C1QTNF4Q9BXJ3 329 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF436Q9C0F3 470 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 AMBNQ9NP70 447 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 DAZ1Q9NQZ3 744 aaKnown RBP3.47□□□□□ -1.85
ATXN3-239ENST00000556315 COPZ2Q9P299 210 aa3.47□□□□□ -1.85
ATXN3-239ENST00000556315 IGLV11-55A0A075B6I3 123 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 IGLV2-18A0A075B6J9 118 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 IGHV3-35A0A0C4DH35 117 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 IGKV1-6A0A0C4DH72 117 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 C15orf61A6NNL5 157 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 TGOLN2O43493 480 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 CD74P04233 296 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 ZNF735P0CB33 412 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 SAA1P0DJI8 122 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-239ENST00000556315 INAFM2P0DMQ5 153 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 RPA2P15927 270 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 SRMP19623 302 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 C4BPBP20851 252 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 NPY1RP25929 384 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 GPR183P32249 361 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 DUTP33316 252 aaKnown RBP3.46□□□□□ -1.86
ATXN3-239ENST00000556315 TALDO1P37837 337 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 RPL27AP46776 148 aaKnown RBP3.46□□□□□ -1.86
ATXN3-239ENST00000556315 ZNF79Q15937 498 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 C12orf74Q32Q52 190 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 RNF212Q495C1 297 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 PYDC2Q56P42 97 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 TMEM41BQ5BJD5 291 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 C10orf55Q5SWW7 151 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 TRIQKQ629K1 86 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 OR10K2Q6IF99 312 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 SPSB3Q6PJ21 355 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 C19orf35Q6ZS72 473 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 SSX9Q7RTT3 188 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 SNX29P2Q8IUI4 249 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 UBE2DNLQ8IWF7 75 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 MS4A15Q8N5U1 240 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 ZNF485Q8NCK3 441 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 OR4A4PQ8NGN8 299 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 OR10J5Q8NHC4 309 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 VSTM2AQ8TAG5 236 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 ZFAND1Q8TCF1 268 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 C15orf40Q8WUR7 153 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 TMEM190Q8WZ59 177 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 SRSF8Q9BRL6 282 aaKnown RBP3.46□□□□□ -1.86
ATXN3-239ENST00000556315 CHRDL1Q9BU40 450 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms