RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 IGKV1OR2-108A0A075B7D4 117 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 TRBV9A0A0B4J1U6 114 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 M0QZK8 103 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 ENSAO43768 121 aaKnown RBP7.76□□□□□ -1.17
SYNE2-213ENST00000554805 MT-ND6P03923 174 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 PYYP10082 97 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 CAMPP49913 170 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 LINC00310P59036 64 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 TCF15Q12870 199 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 TPTE2P1Q5T6R2 138 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 STUMQ69YW2 141 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF474Q6S9Z5 364 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-213ENST00000554805 ZCCHC24Q8N2G6 241 aaKnown RBP7.76□□□□□ -1.17
SYNE2-213ENST00000554805 LOXL4Q96JB6 756 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 COL25A1Q9BXS0 654 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-213ENST00000554805 OSTCQ9NRP0 149 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 NKX6-3A6NJ46 265 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 AMY1AP04745 511 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 RAB4AP20338 218 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 CFHR2P36980 270 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 MFAP2P55001 183 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 CX3CL1P78423 397 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 TIMM23BQ5SRD1 257 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 ATOH7Q8N100 152 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 OR1L8Q8NGR8 309 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 OR10X1Q8NGY0 326 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 BLNKQ8WV28 456 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 NPIPB3Q92617 1050 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 DNAJC4Q9NNZ3 241 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 DKK4Q9UBT3 224 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 IGHV1-46P01743 117 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 GPX1P07203 203 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 CCL3L1P16619 93 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 FAM27E3Q08E93 113 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 CR1LQ2VPA4 569 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 C10orf55Q5SWW7 151 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 WFDC8Q8IUA0 241 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 PRSS33Q8NF86 280 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 GAFA1Q96PS6 74 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 PAXXQ9BUH6 204 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF355PQ9NSJ1 428 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 PTPRQQ9UMZ3 2332 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 CGB3P0DN86 165 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 CGB7P0DN87 165 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 RNASE2P10153 161 aaKnown RBP7.75□□□□□ -1.17
SYNE2-213ENST00000554805 RPL8P62917 257 aaKnown RBP7.75□□□□□ -1.17
SYNE2-213ENST00000554805 CD69Q07108 199 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 Q0VG73 95 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 SPATA45Q537H7 98 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 TMEM136Q6ZRR5 245 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 LHFPL4Q7Z7J7 247 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 WNT10AQ9GZT5 417 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 RPUSD1Q9UJJ7 312 aaKnown RBP7.75□□□□□ -1.17
SYNE2-213ENST00000554805 AMMECR1Q9Y4X0 333 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-213ENST00000554805 DLL1O00548 723 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 HLA-DQA1P01909 254 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 REG1AP05451 166 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 APELAP0DMC3 54 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 ORM2P19652 201 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 C10orf113Q5VZT2 155 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 TEX43Q6ZNM6 134 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 FLYWCH2Q96CP2 140 aaKnown RBP7.75□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF503Q96F45 646 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 RCHY1Q96PM5 261 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 SLC25A33Q9BSK2 321 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 SSUH2Q9Y2M2 353 aa7.75□□□□□ -1.17
SYNE2-213ENST00000554805 IGHV3-21A0A0B4J1V1 117 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 ITGB1BP1O14713 200 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 HSBP1O75506 76 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 TFPI2P48307 235 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 UBE2G1P62253 170 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 COX19Q49B96 90 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 C2orf83Q53S99 150 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 MORN5Q5VZ52 161 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 SEM1Q6ZVN7 128 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 OR5B3Q8NH48 314 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 RNF2Q99496 336 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 C20orf144Q9BQM9 153 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 CDC42EP3Q9UKI2 254 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF257Q9Y2Q1 563 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 A0A1W2PRE2 83 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 ISLRO14498 428 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 LHBP01229 141 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 Q6ZN92 141 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 OR4B1Q8NGF8 309 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 KCNS1Q96KK3 526 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 GOLT1BQ9Y3E0 138 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 LRBAP50851 2863 aa7.74□□□□□ -1.17
SYNE2-213ENST00000554805 PPOXP50336 477 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 SSBP2P81877 361 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 RNASEKQ6P5S7 137 aaKnown RBP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 SLC25A48Q6ZT89 311 aaKnown RBP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 ASCL5Q7RTU5 278 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 FAM168AQ92567 244 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 CCL17Q92583 94 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 GAL3ST2Q9H3Q3 398 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 RNF114Q9Y508 228 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 IGHV3-72A0A0B4J1Y9 119 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 A0A1W2PS18 150 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 H3BTX0 84 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms