RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 UCP1P25874 307 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 SP6Q3SY56 376 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 FAM90A2PQ658T7 463 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 CEMP1Q6PRD7 247 aaPredicted RBP9.41□□□□□ -0.9
LINC00643-202ENST00000553426 FAM219AQ8IW50 185 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 OR13C8Q8NGS7 320 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 LINC00476Q8WZB0 136 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 ST8SIA2Q92186 375 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 METTL26Q96S19 204 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 ABHD1Q96SE0 405 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 RARRES2Q99969 163 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 NAA50Q9GZZ1 169 aaKnown RBP9.41□□□□□ -0.9
LINC00643-202ENST00000553426 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
LINC00643-202ENST00000553426 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.41□□□□□ -0.9
LINC00643-202ENST00000553426 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 TEX13DA0A0J9YY54 714 aaPredicted RBP9.4□□□□□ -0.9
LINC00643-202ENST00000553426 RPS10-NUDT3A0A1W2PQS6 291 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 DISC1C4P0D8 188 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 CLN5O75503 358 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 RNASE2P10153 161 aaKnown RBP9.4□□□□□ -0.9
LINC00643-202ENST00000553426 RPL5P46777 297 aaKnown RBP9.4□□□□□ -0.9
LINC00643-202ENST00000553426 SPCS3P61009 180 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 GPR141Q7Z602 305 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 OR4D10Q8NGI6 311 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 MARCH1Q8TCQ1 289 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 TMEM230Q96A57 120 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 GRAMD2BQ96HH9 432 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 TMEM222Q9H0R3 208 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 MS4A6AQ9H2W1 248 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 RABL2AQ9UBK7 228 aaPredicted RBP9.4□□□□□ -0.9
LINC00643-202ENST00000553426 RABAC1Q9UI14 185 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 RABL2BQ9UNT1 228 aa9.4□□□□□ -0.9
LINC00643-202ENST00000553426 TRAV2A0A0B4J234 112 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 HTR2BP41595 481 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 EIF2B2P49770 351 aaKnown RBP9.39□□□□□ -0.91
LINC00643-202ENST00000553426 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00643-202ENST00000553426 DHODHQ02127 395 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 SURF2Q15527 256 aaPredicted RBP9.39□□□□□ -0.91
LINC00643-202ENST00000553426 ZNF124Q15973 351 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 PVRIGQ6DKI7 326 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 OR4X1Q8NH49 305 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 OR52E5Q8NH55 327 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 ZNF414Q96IQ9 312 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 MFFQ9GZY8 342 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 HEYLQ9NQ87 328 aaPredicted RBP9.39□□□□□ -0.91
LINC00643-202ENST00000553426 CACFD1Q9UGQ2 172 aa9.39□□□□□ -0.91
LINC00643-202ENST00000553426 A0A1B0GU03 582 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 CDS2O95674 445 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 CA1P00915 261 aaPredicted RBP9.38□□□□□ -0.91
LINC00643-202ENST00000553426 APOHP02749 345 aaPredicted RBP9.38□□□□□ -0.91
LINC00643-202ENST00000553426 IFNA4P05014 189 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 OR5AC1P0C628 307 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 DEFB131AP59861 70 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 IL18Q14116 193 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 TMEM187Q14656 261 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 STHQ8IWL8 128 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 RBPMSQ93062 196 aaKnown RBP9.38□□□□□ -0.91
LINC00643-202ENST00000553426 PRRT1Q99946 306 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 MRPS26Q9BYN8 205 aaKnown RBP9.38□□□□□ -0.91
LINC00643-202ENST00000553426 NAA60Q9H7X0 242 aa9.38□□□□□ -0.91
LINC00643-202ENST00000553426 CEBPZOSA8MTT3 80 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 AKAIN1P0CW23 69 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 SMIM18P0DKX4 95 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 SLC25A4P12235 298 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 LEMD1Q68G75 181 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 ETFRF1Q6IPR1 90 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 NOXA1Q86UR1 476 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 STXBP6Q8NFX7 210 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 C11orf45Q8TAV5 145 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 GLYATL2Q8WU03 294 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 PHLDA1Q8WV24 401 aaPredicted RBP9.37□□□□□ -0.91
LINC00643-202ENST00000553426 SMIM4Q8WVI0 70 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 DIRAS2Q96HU8 199 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 SCGB3A2Q96PL1 93 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 KCNIP3Q9Y2W7 256 aa9.37□□□□□ -0.91
LINC00643-202ENST00000553426 DNAH10Q8IVF4 4471 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 A0A0G2JRQ6 117 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 HELTA6NFD8 242 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 CTDSP2O14595 271 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 CRYBB3P26998 211 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 P2RY1P47900 373 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 AP2S1P53680 142 aaPredicted RBP9.36□□□□□ -0.91
LINC00643-202ENST00000553426 BSXQ3C1V8 233 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 AARDQ4LEZ3 155 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 TMEM41BQ5BJD5 291 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 TMEM268Q5VZI3 342 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 FAAP20Q6NZ36 180 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 Q6ZRM9 215 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 OR1S2Q8NGQ3 325 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 RNASEH2CQ8TDP1 164 aaKnown RBP9.36□□□□□ -0.91
LINC00643-202ENST00000553426 Q8WTZ3 238 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 RTBDNQ9BSG5 229 aaPredicted RBP9.36□□□□□ -0.91
LINC00643-202ENST00000553426 MIXL1Q9H2W2 232 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 C11orf68Q9H3H3 251 aaKnown RBP9.36□□□□□ -0.91
LINC00643-202ENST00000553426 FNDC4Q9H6D8 234 aaPredicted RBP9.36□□□□□ -0.91
LINC00643-202ENST00000553426 CACNG5Q9UF02 275 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms