RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SCARB1Q8WTV0 552 aa9.27□□□□□ -0.93
CHD4-203ENST00000535717 TMEM170AQ8WVE7 144 aa9.27□□□□□ -0.93
CHD4-203ENST00000535717 DLX4Q92988 240 aaPredicted RBP9.27□□□□□ -0.93
CHD4-203ENST00000535717 HSPB11Q9Y547 144 aa9.27□□□□□ -0.93
CHD4-203ENST00000535717 PPP5D1E7EU14 171 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 SYNGR2O43760 224 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 MED6O75586 246 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 MT-CO2P00403 227 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 IGHV3-48P01763 117 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 IAPPP10997 89 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 ID3Q02535 119 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 C2orf83Q53S99 150 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 FAM209BQ5JX69 171 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 PXDC1Q5TGL8 231 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 COMMD7Q86VX2 200 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 SLC24A4Q8NFF2 622 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 DCUN1D4Q92564 292 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 PINX1Q96BK5 328 aaKnown RBP9.26□□□□□ -0.93
CHD4-203ENST00000535717 C21orf62Q9NYP8 219 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 GSKIPQ9P0R6 139 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 UBQLN2Q9UHD9 624 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 MEGF8Q7Z7M0 2845 aa9.26□□□□□ -0.93
CHD4-203ENST00000535717 C5orf51A6NDU8 294 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 KRBOX1C9JBD0 128 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 F8W735 103 aaPredicted RBP9.25□□□□□ -0.93
CHD4-203ENST00000535717 WRBO00258 174 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 IFNA10P01566 189 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 CLEC3BP05452 202 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 IGLL1P15814 213 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 NPY1RP25929 384 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 GPR183P32249 361 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 ARL3P36405 182 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 NKX2-1P43699 371 aaPredicted RBP9.25□□□□□ -0.93
CHD4-203ENST00000535717 POLR2GP62487 172 aaKnown RBP eCLIP9.25□□□□□ -0.93
CHD4-203ENST00000535717 FLI1Q01543 452 aaPredicted RBP9.25□□□□□ -0.93
CHD4-203ENST00000535717 KLF5Q13887 457 aaPredicted RBP9.25□□□□□ -0.93
CHD4-203ENST00000535717 FNDC4Q9H6D8 234 aaPredicted RBP9.25□□□□□ -0.93
CHD4-203ENST00000535717 ZC4H2Q9NQZ6 224 aa9.25□□□□□ -0.93
CHD4-203ENST00000535717 OR2T8A6NH00 312 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 CORTO00230 105 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 OVOL1O14753 267 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 GGCTO75223 188 aaKnown RBP9.24□□□□□ -0.93
CHD4-203ENST00000535717 OR2C1O95371 312 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 SCGB1D2O95969 90 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 MBPP02686 304 aaPredicted RBP9.24□□□□□ -0.93
CHD4-203ENST00000535717 MFAP4P55083 255 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 MLANAQ16655 118 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 RPEL1Q2QD12 228 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 OXLD1Q5BKU9 147 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 GSG1LQ6UXU4 331 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 EIF4E3Q8N5X7 224 aaKnown RBP9.24□□□□□ -0.93
CHD4-203ENST00000535717 RNASEH2CQ8TDP1 164 aaKnown RBP9.24□□□□□ -0.93
CHD4-203ENST00000535717 RCC1LQ96I51 464 aaKnown RBP9.24□□□□□ -0.93
CHD4-203ENST00000535717 C2orf50Q96LR7 162 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 CIB3Q96Q77 187 aaPredicted RBP9.24□□□□□ -0.93
CHD4-203ENST00000535717 ATP6V0BQ99437 205 aa9.24□□□□□ -0.93
CHD4-203ENST00000535717 C15orf62A8K5M9 175 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 G3V4G9 280 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 GOSR2O14653 212 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 TGOLN2O43493 480 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 SSNA1O43805 119 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 SSSCA1O60232 199 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 SIX6O95475 246 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 TMEM50AO95807 157 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 ATF4P18848 351 aaPredicted RBP9.23□□□□□ -0.93
CHD4-203ENST00000535717 FCGR2BP31994 310 aaPredicted RBP9.23□□□□□ -0.93
CHD4-203ENST00000535717 OPRK1P41145 380 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 ATP5IP56385 69 aaPredicted RBP9.23□□□□□ -0.93
CHD4-203ENST00000535717 SYNJ2BPP57105 145 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 RAB14P61106 215 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 Q56UQ5 140 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 ACSM6Q6P461 480 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 UBAC2Q8NBM4 344 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 BSCL2Q96G97 398 aaPredicted RBP9.23□□□□□ -0.93
CHD4-203ENST00000535717 OR4C12Q96R67 309 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 TXN2Q99757 166 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 CHRDL1Q9BU40 450 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 MED28Q9H204 178 aa9.23□□□□□ -0.93
CHD4-203ENST00000535717 MRPL36Q9P0J6 103 aaKnown RBP9.23□□□□□ -0.93
CHD4-203ENST00000535717 RCL1Q9Y2P8 373 aaKnown RBP9.23□□□□□ -0.93
CHD4-203ENST00000535717 SEC14L6B5MCN3 397 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 LY86O95711 162 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 IFNA4P05014 189 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 CTSGP08311 255 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 ADMP35318 185 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 PAX9P55771 341 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 IL15RAQ13261 267 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 SAMD5Q5TGI4 173 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 SPSB3Q6PJ21 355 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 GPHB5Q86YW7 130 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 C1QL4Q86Z23 238 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 SMIM8Q96KF7 97 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 MCRIP2Q9BUT9 160 aaKnown RBP9.22□□□□□ -0.93
CHD4-203ENST00000535717 DNAH3Q8TD57 4116 aa9.22□□□□□ -0.93
CHD4-203ENST00000535717 IGHV3-35A0A0C4DH35 117 aa9.21□□□□□ -0.94
CHD4-203ENST00000535717 H3BP45 60 aa9.21□□□□□ -0.94
CHD4-203ENST00000535717 K7EPK0 472 aa9.21□□□□□ -0.94
CHD4-203ENST00000535717 NPBWR1P48145 328 aa9.21□□□□□ -0.94
CHD4-203ENST00000535717 RAB11AP62491 216 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms