RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ANXA8P13928 327 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 NQO2P16083 231 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 GALP22466 123 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 ATP5J2P56134 94 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 UBE2KP61086 200 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 RPS24P62847 133 aaKnown RBP-0.9□□□□□ -2.55
COPB1-212ENST00000534771 SPINK13Q1W4C9 94 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 C6orf183Q5T699 404 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 ANXA8L1Q5VT79 327 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 C5orf46Q6UWT4 87 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 ARL6IP6Q8N6S5 226 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 UBL4BQ8N7F7 174 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 SPERTQ8NA61 448 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 TET1Q8NFU7 2136 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 OR5A1Q8NGJ0 315 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 OR4A15Q8NGL6 344 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 OR2T27Q8NH04 317 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 TMEM254Q8TBM7 123 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 HAVCR2Q8TDQ0 301 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 PPCDCQ96CD2 204 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 TMEM56Q96MV1 263 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 LYSMD1Q96S90 227 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 MROQ9BYG7 248 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 TMEM138Q9NPI0 162 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 HSPB8Q9UJY1 196 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 ANAPC10Q9UM13 185 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 EPDR1Q9UM22 224 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.9□□□□□ -2.55
COPB1-212ENST00000534771 SBF1O95248 1867 aa-0.9□□□□□ -2.55
COPB1-212ENST00000534771 KNTC1P50748 2209 aa-0.91□□□□□ -2.55
COPB1-212ENST00000534771 TRAV23DV6A0A075B6W5 121 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 IGHV1-69-2A0A0G2JMI3 117 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 GSTTP1A0A1W2PQM5 241 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 PQLC2LA1A4F0 135 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 JMJD7-PLA2G4BH0Y9G9 81 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 TIMM17BO60830 172 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 IL6P05231 212 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 CD14P08571 375 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 CXCL2P19875 107 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 CXCL3P19876 107 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 DLX6P56179 175 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 RAB8AP61006 207 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 BEX3Q00994 111 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 SMAGPQ0VAQ4 97 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 STK38Q15208 465 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 SPANXN3Q5MJ09 141 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 C2orf82Q6UX34 121 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 PLEKHG7Q6ZR37 379 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 CLVS1Q8IUQ0 354 aaPredicted RBP-0.91□□□□□ -2.56
COPB1-212ENST00000534771 CDRT4Q8N9R6 151 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 OR52E4Q8NGH9 312 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 OR10D3Q8NH80 312 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 OR5AK3PQ8NH89 298 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 ROPN1LQ96C74 230 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 PLEKHB2Q96CS7 222 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 FAM210AQ96ND0 272 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 NSRP1Q9H0G5 558 aaKnown RBP-0.91□□□□□ -2.56
COPB1-212ENST00000534771 EFCAB1Q9HAE3 211 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 NXT1Q9UKK6 140 aaKnown RBP-0.91□□□□□ -2.56
COPB1-212ENST00000534771 SLC35A3Q9Y2D2 325 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 POLR1DQ9Y2S0 133 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 F8P00451 2351 aa-0.91□□□□□ -2.56
COPB1-212ENST00000534771 MTORP42345 2549 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 GCN1Q92616 2671 aaKnown RBP-0.92□□□□□ -2.56
COPB1-212ENST00000534771 TCRBV4S1A1TA0A5B7 111 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 DAPL1A0PJW8 107 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 F8W1H4 67 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 AZIN1O14977 448 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 NEMFO60524 1076 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 STAG3L3P0CL85 134 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 MAP2K4P45985 399 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 IFITM2Q01629 132 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 JOSD1Q15040 202 aaPredicted RBP-0.92□□□□□ -2.56
COPB1-212ENST00000534771 VAMP3Q15836 100 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 ZNF833PQ6ZTB9 187 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 MIR17HGQ75NE6 70 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 TMCO2Q7Z6W1 182 aaPredicted RBP-0.92□□□□□ -2.56
COPB1-212ENST00000534771 TEN1Q86WV5 123 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 BPIFA4PQ86YQ2 179 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 IQCF2Q8IXL9 164 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 SIGLECL1Q8N7X8 197 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 GPR146Q96CH1 333 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 MUCL1Q96DR8 90 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 DERL1Q9BUN8 251 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 TIPINQ9BVW5 301 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 C6orf62Q9GZU0 229 aaPredicted RBP-0.92□□□□□ -2.56
COPB1-212ENST00000534771 HES4Q9HCC6 221 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 C14orf132Q9NPU4 83 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 NHP2Q9NX24 153 aaKnown RBP-0.92□□□□□ -2.56
COPB1-212ENST00000534771 RBMX2Q9Y388 322 aaKnown RBP-0.92□□□□□ -2.56
COPB1-212ENST00000534771 V9GYY5 206 aaPredicted RBP-0.92□□□□□ -2.56
COPB1-212ENST00000534771 RIMS2Q9UQ26 1411 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 PLXNA4Q9HCM2 1894 aa-0.92□□□□□ -2.56
COPB1-212ENST00000534771 VPS13DQ5THJ4 4388 aa-0.93□□□□□ -2.56
COPB1-212ENST00000534771 TMEM94Q12767 1356 aa-0.93□□□□□ -2.56
COPB1-212ENST00000534771 MYO18AQ92614 2054 aaKnown RBP-0.93□□□□□ -2.56
COPB1-212ENST00000534771 LAMA1P25391 3075 aa-0.93□□□□□ -2.56
COPB1-212ENST00000534771 GOLGA8QA0A0J9YX86 632 aa-0.93□□□□□ -2.56
COPB1-212ENST00000534771 TEX50A0A1B0GTY4 177 aa-0.93□□□□□ -2.56
COPB1-212ENST00000534771 PRORSD1PA6NEY8 169 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms