RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 Q6AWC8 147 aa6.66□□□□□ -1.34
CSRP1-218ENST00000533402 ZNF818PQ6ZRF7 136 aa6.66□□□□□ -1.34
CSRP1-218ENST00000533402 RNASE8Q8TDE3 154 aaKnown RBP6.66□□□□□ -1.34
CSRP1-218ENST00000533402 IFI27L1Q96BM0 104 aa6.66□□□□□ -1.34
CSRP1-218ENST00000533402 THSD7BQ9C0I4 1608 aa6.66□□□□□ -1.34
CSRP1-218ENST00000533402 PEX7O00628 323 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 ZIC3O60481 467 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 LGALS1P09382 135 aaKnown RBP6.65□□□□□ -1.34
CSRP1-218ENST00000533402 CMC4P56277 68 aaPredicted RBP6.65□□□□□ -1.34
CSRP1-218ENST00000533402 ZXDCQ2QGD7 858 aaPredicted RBP6.65□□□□□ -1.34
CSRP1-218ENST00000533402 CACNA1EQ15878 2313 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 SUMO2P61956 95 aaKnown RBP6.65□□□□□ -1.34
CSRP1-218ENST00000533402 Q6ZS52 159 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 UBE2DNLQ8IWF7 75 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 DMRTC2Q8IXT2 367 aaPredicted RBP6.65□□□□□ -1.34
CSRP1-218ENST00000533402 OSTCQ9NRP0 149 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 FZR1Q9UM11 496 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 MYF5P13349 255 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 IGFBP2P18065 325 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 CDKN1AP38936 164 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 RTBDNQ9BSG5 229 aaPredicted RBP6.65□□□□□ -1.34
CSRP1-218ENST00000533402 ZNF703Q9H7S9 590 aaPredicted RBP6.65□□□□□ -1.34
CSRP1-218ENST00000533402 SLC25A15Q9Y619 301 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 A0A1W2PQF6 199 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 SYS1-DBNDD2H3BUS1 97 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 CCL25O15444 150 aa6.65□□□□□ -1.34
CSRP1-218ENST00000533402 PRR19A6NJB7 356 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 H0YIZ8 118 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 PLNP26678 52 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 MST1P26927 711 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 METTL26Q96S19 204 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 TRBV20-1A0A075B6N2 111 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 TIMP3P35625 211 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 MORN3Q6PF18 240 aaPredicted RBP6.65□□□□□ -1.35
CSRP1-218ENST00000533402 C1orf162Q8NEQ5 155 aaPredicted RBP6.65□□□□□ -1.35
CSRP1-218ENST00000533402 SPINK2P20155 84 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 TFF3Q07654 80 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 Q8NFD4 153 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 OCC1Q8TAD7 63 aa6.65□□□□□ -1.35
CSRP1-218ENST00000533402 EAF1Q96JC9 268 aaPredicted RBP6.65□□□□□ -1.35
CSRP1-218ENST00000533402 SNRPD3P62318 126 aaKnown RBP6.64□□□□□ -1.35
CSRP1-218ENST00000533402 GATAD1Q8WUU5 269 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 VSTM2LQ96N03 204 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 GGTLC1Q9BX51 225 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 CD160O95971 181 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 STPG4Q8N801 248 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 PATE1Q8WXA2 126 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 SP9P0CG40 484 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 GGTLC3B5MD39 225 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 SYNGR3O43761 229 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 IGLC2P0DOY2 106 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 IGLC3P0DOY3 106 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 CENPVQ7Z7K6 275 aaPredicted RBP6.64□□□□□ -1.35
CSRP1-218ENST00000533402 HAPLN4Q86UW8 402 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 ZNF114Q8NC26 417 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 FMC1Q96HJ9 113 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 C9JAW5 83 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 M0R2P5 195 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 IL6RP08887 468 aaPredicted RBP6.64□□□□□ -1.35
CSRP1-218ENST00000533402 CSRP1P21291 193 aaKnown RBP6.64□□□□□ -1.35
CSRP1-218ENST00000533402 PPP1R27Q86WC6 154 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 IGKV3-7A0A075B6H7 116 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 H3BTX0 84 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
CSRP1-218ENST00000533402 OR2H2O95918 312 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 SMPXQ9UHP9 88 aa6.64□□□□□ -1.35
CSRP1-218ENST00000533402 KLF2Q9Y5W3 355 aaPredicted RBP6.64□□□□□ -1.35
CSRP1-218ENST00000533402 CT62P0C5K7 136 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 IGHV2OR16-5A0A0B4J2B6 119 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 CGB1A6NKQ9 187 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 GTSCR1Q86UQ5 136 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 C1QTNF4Q9BXJ3 329 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 J3QT63 122 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 CRYBA4P53673 196 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 SLC25A10Q9UBX3 287 aaPredicted RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 ACACAQ13085 2346 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 ZNF106Q9H2Y7 1883 aaKnown RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 TRAV26-1A0A087WT03 109 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 A0A0J9YW62 118 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 KLF17Q5JT82 389 aaPredicted RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 NEU4Q8WWR8 484 aaPredicted RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 PILRBQ9UKJ0 227 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 RBMY1BA6NDE4 496 aaKnown RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 RBMY1EA6NEQ0 496 aaKnown RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 B9A039 149 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 RBMY1DP0C7P1 496 aaKnown RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 RBMY1A1P0DJD3 496 aaKnown RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 RBMY1CP0DJD4 496 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 FGF12P61328 243 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 ABHD12Q8N2K0 398 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 GDF15Q99988 308 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 PEMTQ9UBM1 199 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 TCF20Q9UGU0 1960 aaKnown RBP6.63□□□□□ -1.35
CSRP1-218ENST00000533402 CELA3AP09093 270 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 ZNF525Q8N782 197 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 OR10J6PQ8NGY7 276 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 NDUFC2O95298 119 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 RND2P52198 227 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms