RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 TIGITQ495A1 244 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 LINC00173Q6ZV60 143 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 OR8B3Q8NGG8 313 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 OR8B2Q96RD0 313 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 DMXL1Q9Y485 3027 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 hDV102S1A0JD36 115 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 AREGP15514 252 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 TMPRSS3P57727 454 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 TBR1Q16650 682 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 AMMECR1LQ6DCA0 310 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 C1orf162Q8NEQ5 155 aaPredicted RBP11.6□□□□□ -0.55
USP48-213ENST00000529637 MCRIP2Q9BUT9 160 aaKnown RBP11.6□□□□□ -0.55
USP48-213ENST00000529637 ZNF71Q9NQZ8 489 aaPredicted RBP11.6□□□□□ -0.55
USP48-213ENST00000529637 TNFRSF19Q9NS68 423 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 SPTA1P02549 2419 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 NUDT3O95989 172 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 MSMPQ1L6U9 139 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 TEPPQ6URK8 271 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 PNKDQ8N490 385 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 OR52E5Q8NH55 327 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 ZNF355PQ9NSJ1 428 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 C15orf65H3BRN8 121 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 UBE2G1P62253 170 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 UTF1Q5T230 341 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 ZNF596Q8TC21 504 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 ITLN1Q8WWA0 313 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 IL19Q9UHD0 177 aa11.6□□□□□ -0.55
USP48-213ENST00000529637 LAMA5O15230 3695 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 MUC21A0A0G2JKD1 596 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 MUC21A0A140T8X8 626 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 ISLRO14498 428 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 MGST3O14880 152 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 LINC00869P0C866 280 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 MFAP2P55001 183 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 MUC21Q5SSG8 566 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 OR4A47Q6IF82 309 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 GCSAMQ8N6F7 178 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 URB1-AS1Q96HZ7 61 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 ZNF331Q9NQX6 463 aaPredicted RBP11.59□□□□□ -0.55
USP48-213ENST00000529637 PLSCR4Q9NRQ2 329 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 NPY1RP25929 384 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 RHOGP84095 191 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 FOXE3Q13461 319 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 LRRC10Q5BKY1 277 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 TRAT1Q6PIZ9 186 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 RPRMLQ8N4K4 120 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 TMEM140Q9NV12 185 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 ARFGEF3Q5TH69 2177 aa11.59□□□□□ -0.55
USP48-213ENST00000529637 SRRM5B3KS81 715 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 OR7C2O60412 319 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 MT-CO2P00403 227 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 CAMPP49913 170 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 ZNF134P52741 427 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 GUSBP1Q15486 140 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 C1orf229Q6ZS94 237 aaPredicted RBP11.58□□□□□ -0.56
USP48-213ENST00000529637 ZADH2Q8N4Q0 377 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 ENY2Q9NPA8 101 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 CALYQ9NYX4 217 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 TCF19Q9Y242 345 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 IZUMO1RA6ND01 250 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 PRR20EP86478 221 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 PRR20CP86479 221 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 PRR20DP86480 221 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 PRR20BP86481 221 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 PRR20AP86496 221 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 NUDT10Q8NFP7 164 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 IGF2BP2-AS1Q96M15 143 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 MRPL27Q9P0M9 148 aaKnown RBP11.58□□□□□ -0.56
USP48-213ENST00000529637 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
USP48-213ENST00000529637 IGKV1OR2-108A0A075B7D4 117 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 VWC2LB2RUY7 222 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 MBNL2Q5VZF2 373 aaKnown RBP11.58□□□□□ -0.56
USP48-213ENST00000529637 JPT1Q9UK76 154 aa11.58□□□□□ -0.56
USP48-213ENST00000529637 OR4C46A6NHA9 309 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 IGLV1-44P01699 117 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 RPL19P84098 196 aaKnown RBP11.57□□□□□ -0.56
USP48-213ENST00000529637 MLANAQ16655 118 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 BVES-AS1Q5T3Y7 98 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 ZNF841Q6ZN19 808 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 OR2T6Q8NHC8 308 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 DKK4Q9UBT3 224 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 CORTO00230 105 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 MORN5Q5VZ52 161 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 DUX4L9Q6RFH8 374 aaPredicted RBP11.57□□□□□ -0.56
USP48-213ENST00000529637 NUP35Q8NFH5 326 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 NABP2Q9BQ15 211 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 SLC25A15Q9Y619 301 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 ARL2-SNX15V9GYD0 113 aa11.57□□□□□ -0.56
USP48-213ENST00000529637 SPENQ96T58 3664 aaKnown RBP11.57□□□□□ -0.56
USP48-213ENST00000529637 ZGRF1Q86YA3 2104 aa11.56□□□□□ -0.56
USP48-213ENST00000529637 CSTL1Q9H114 145 aa11.56□□□□□ -0.56
USP48-213ENST00000529637 PPOXP50336 477 aa11.56□□□□□ -0.56
USP48-213ENST00000529637 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
USP48-213ENST00000529637 FAM120AOSQ5T036 256 aa11.56□□□□□ -0.56
USP48-213ENST00000529637 PRR27Q6MZM9 219 aa11.56□□□□□ -0.56
USP48-213ENST00000529637 TRAV5A0A0B4J249 113 aa11.55□□□□□ -0.56
USP48-213ENST00000529637 SMIM15Q7Z3B0 74 aa11.55□□□□□ -0.56
USP48-213ENST00000529637 OR4S2Q8NH73 311 aa11.55□□□□□ -0.56
USP48-213ENST00000529637 IFI27L2Q9H2X8 130 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms