RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 MRPL36Q9P0J6 103 aaKnown RBP10.76□□□□□ -0.69
USF1-209ENST00000529476 NOTCH1P46531 2555 aa10.76□□□□□ -0.69
USF1-209ENST00000529476 OR2T8A6NH00 312 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 LY86O95711 162 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 CXCL3P19876 107 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 ZP3P21754 424 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 MFAP4P55083 255 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 ATP5IP56385 69 aaPredicted RBP10.75□□□□□ -0.69
USF1-209ENST00000529476 RPP30P78346 268 aaKnown RBP10.75□□□□□ -0.69
USF1-209ENST00000529476 FAM209BQ5JX69 171 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 ACSM6Q6P461 480 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 OR11H7Q8NGC8 314 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 DCUN1D4Q92564 292 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 DLX4Q92988 240 aaPredicted RBP10.75□□□□□ -0.69
USF1-209ENST00000529476 NMES1Q9C002 83 aa10.75□□□□□ -0.69
USF1-209ENST00000529476 STRAPQ9Y3F4 350 aaKnown RBP10.75□□□□□ -0.69
USF1-209ENST00000529476 RPS10-NUDT3A0A1W2PQS6 291 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 L7N2F9 121 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 TGOLN2O43493 480 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 GGCTO75223 188 aaKnown RBP10.74□□□□□ -0.69
USF1-209ENST00000529476 OR2C1O95371 312 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 CD33P20138 364 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 RAB11AP62491 216 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 VAMP2P63027 116 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 CYCSP99999 105 aaKnown RBP10.74□□□□□ -0.69
USF1-209ENST00000529476 RPEL1Q2QD12 228 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 WFDC9Q8NEX5 89 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 TXN2Q99757 166 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 C11orf1Q9H5F2 150 aa10.74□□□□□ -0.69
USF1-209ENST00000529476 NBEAL2Q6ZNJ1 2754 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 TSC22D2O75157 780 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 FCGR2BP31994 310 aaPredicted RBP10.73□□□□□ -0.69
USF1-209ENST00000529476 ADMP35318 185 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 SYNJ2BPP57105 145 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 TAS2R30P59541 319 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 RRAS2P62070 204 aaPredicted RBP10.73□□□□□ -0.69
USF1-209ENST00000529476 CD69Q07108 199 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 KLF5Q13887 457 aaPredicted RBP10.73□□□□□ -0.69
USF1-209ENST00000529476 LRRC37A5PQ49AS3 106 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 PRSS54Q6PEW0 395 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 SLC16A13Q7RTY0 426 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 BSCL2Q96G97 398 aaPredicted RBP10.73□□□□□ -0.69
USF1-209ENST00000529476 ATP6V0BQ99437 205 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 CHRDL1Q9BU40 450 aa10.73□□□□□ -0.69
USF1-209ENST00000529476 CMYA5Q8N3K9 4069 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 IGHV3-35A0A0C4DH35 117 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 PRSS46E5RG02 174 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 OVOL1O14753 267 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 GNG7O60262 68 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 CCNKO75909 580 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 CTSGP08311 255 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 SLC25A4P12235 298 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 PVALBP20472 110 aaPredicted RBP10.72□□□□□ -0.69
USF1-209ENST00000529476 NPBWR1P48145 328 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 BCAP31P51572 246 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 RND2P52198 227 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 ETFRF1Q6IPR1 90 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 TMEM14EPQ6UXP3 125 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 OR4X1Q8NH49 305 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 PPP1R1CQ8WVI7 109 aa10.72□□□□□ -0.69
USF1-209ENST00000529476 GAR1Q9NY12 217 aaKnown RBP10.72□□□□□ -0.69
USF1-209ENST00000529476 KMT2CQ8NEZ4 4911 aaKnown RBP10.71□□□□□ -0.69
USF1-209ENST00000529476 FAM24AA6NFZ4 105 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 PMS2P5A8MQ11 134 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 H0YIZ8 118 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 NUPL2O15504 423 aaKnown RBP10.71□□□□□ -0.69
USF1-209ENST00000529476 CLN5O75503 358 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 DEDDO75618 318 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 METTL15P1P0C7V9 234 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 IGLL1P15814 213 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 GPX4P36969 197 aaPredicted RBP10.71□□□□□ -0.69
USF1-209ENST00000529476 CAV2P51636 162 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 OR8G2PQ6IF36 304 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 SPSB3Q6PJ21 355 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 C1QL4Q86Z23 238 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 ACY3Q96HD9 319 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 ZNF414Q96IQ9 312 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 OR5AC2Q9NZP5 309 aa10.71□□□□□ -0.69
USF1-209ENST00000529476 RLN2P04090 185 aa10.7□□□□□ -0.7
USF1-209ENST00000529476 GAMTQ14353 236 aa10.7□□□□□ -0.7
USF1-209ENST00000529476 HAPLN4Q86UW8 402 aa10.7□□□□□ -0.7
USF1-209ENST00000529476 GPHB5Q86YW7 130 aa10.7□□□□□ -0.7
USF1-209ENST00000529476 TMEM116Q8NCL8 245 aa10.7□□□□□ -0.7
USF1-209ENST00000529476 CACNG8Q8WXS5 425 aa10.7□□□□□ -0.7
USF1-209ENST00000529476 NPIPB3Q92617 1050 aa10.7□□□□□ -0.7
USF1-209ENST00000529476 RCC1LQ96I51 464 aaKnown RBP10.7□□□□□ -0.7
USF1-209ENST00000529476 SLC35E1Q96K37 410 aa10.7□□□□□ -0.7
USF1-209ENST00000529476 ZNF436Q9C0F3 470 aaPredicted RBP10.7□□□□□ -0.7
USF1-209ENST00000529476 LYRM2Q9NU23 88 aaPredicted RBP10.7□□□□□ -0.7
USF1-209ENST00000529476 RYR3Q15413 4870 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 IGSF23A1L1A6 192 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 MPC2O95563 127 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 ARL16Q0P5N6 197 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 TIGITQ495A1 244 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 FAM106AQ4KMX7 169 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 UNQ9165/PRO28630Q6UXU0 137 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 Q6ZNX1 250 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 ACOT7LQ6ZUV0 252 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 OR9G4Q8NGQ1 327 aa10.69□□□□□ -0.7
USF1-209ENST00000529476 RNF126Q9BV68 326 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms