RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PSME3P61289 254 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 TBPL1P62380 186 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 HIST1H3AP68431 136 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 BTN3A2P78410 334 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 H3F3AP84243 136 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 FUT5Q11128 374 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 EIF4EBP1Q13541 118 aaPredicted RBP1.84□□□□□ -2.11
HERC4-215ENST00000515753 PLPPR5Q32ZL2 321 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 DEFB134Q4QY38 66 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 C1orf194Q5T5A4 169 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 TMEM42Q69YG0 159 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 SBSNQ6UWP8 590 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 DAZ4Q86SG3 579 aaKnown RBP1.84□□□□□ -2.11
HERC4-215ENST00000515753 OR6V1Q8N148 313 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 C3orf22Q8N5N4 141 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 DEFB125Q8N687 156 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 PXT1Q8NFP0 134 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 OR4A5Q8NH83 315 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 KLF14Q8TD94 323 aaPredicted RBP1.84□□□□□ -2.11
HERC4-215ENST00000515753 MAL2Q969L2 176 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 CPNE2Q96FN4 548 aaPredicted RBP1.84□□□□□ -2.11
HERC4-215ENST00000515753 BTF3L4Q96K17 158 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 CEP19Q96LK0 163 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 DOHHQ9BU89 302 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 EFCAB11Q9BUY7 163 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 ZNF286AQ9HBT8 521 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 DAZ1Q9NQZ3 744 aaKnown RBP1.84□□□□□ -2.11
HERC4-215ENST00000515753 PAQR5Q9NXK6 330 aaPredicted RBP1.84□□□□□ -2.11
HERC4-215ENST00000515753 WASHC3Q9Y3C0 194 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 TRAPPC1Q9Y5R8 145 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 S4R3C0 116 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 V9GYQ6 96 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 ANKRD11Q6UB99 2663 aaPredicted RBP1.84□□□□□ -2.11
HERC4-215ENST00000515753 PCM1Q15154 2024 aa1.84□□□□□ -2.12
HERC4-215ENST00000515753 AHCTF1Q8WYP5 2266 aa1.84□□□□□ -2.12
HERC4-215ENST00000515753 FRYLO94915 3013 aa1.84□□□□□ -2.12
HERC4-215ENST00000515753 MYO18AQ92614 2054 aaKnown RBP1.84□□□□□ -2.12
HERC4-215ENST00000515753 LAMA5O15230 3695 aa1.84□□□□□ -2.12
HERC4-215ENST00000515753 ZZEF1O43149 2961 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 SHROOM3Q8TF72 1996 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 IGSF10Q6WRI0 2623 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 HELZ2Q9BYK8 2649 aaKnown RBP1.83□□□□□ -2.12
HERC4-215ENST00000515753 MYOFQ9NZM1 2061 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 A0A087WUJ7 227 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 C7orf66A4D0T2 115 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 VGLL3A8MV65 326 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 EEF1E1-BLOC1S5C9J1V9 151 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 TMEM238C9JI98 176 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 C15orf65H3BRN8 121 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 EEF1E1O43324 174 aaKnown RBP1.83□□□□□ -2.12
HERC4-215ENST00000515753 TTRP02766 147 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 IGLV7-43P04211 117 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 HIST1H1TP22492 207 aaPredicted RBP1.83□□□□□ -2.12
HERC4-215ENST00000515753 GABRA3P34903 492 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 RPL22P35268 128 aaKnown RBP1.83□□□□□ -2.12
HERC4-215ENST00000515753 TGFBR1P36897 503 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 GZMMP51124 257 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 AKR1C2P52895 323 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 LINC00313P59037 77 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 BTG2P78543 158 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 HOXC5Q00444 222 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 IFITM2Q01629 132 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 ZNF616Q08AN1 781 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 PRDX4Q13162 271 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 ZNF791Q3KP31 576 aaPredicted RBP1.83□□□□□ -2.12
HERC4-215ENST00000515753 CCSMST1Q4G0I0 132 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 SPANXN3Q5MJ09 141 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 FAM201AQ5SY85 155 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 HACD4Q5VWC8 232 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 ZFAND6Q6FIF0 208 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 C5orf46Q6UWT4 87 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 C16orf47Q6ZP98 133 aaPredicted RBP1.83□□□□□ -2.12
HERC4-215ENST00000515753 TMED4Q7Z7H5 227 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 LRP11Q86VZ4 500 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 CALHM3Q86XJ0 350 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 RPRMLQ8N4K4 120 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 TEX29Q8N6K0 151 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 WFDC11Q8NEX6 87 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 OR10X1Q8NGY0 326 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 CD200R1Q8TD46 325 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 NAT14Q8WUY8 206 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 TSLPQ969D9 159 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 BORCS7Q96B45 105 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 OR52B2Q96RD2 323 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 CCL19Q99731 98 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 TMEM109Q9BVC6 243 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 OR8D2Q9GZM6 311 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 OR2D2Q9H210 308 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 DCSTAMPQ9H295 470 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 CENPHQ9H3R5 247 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 NMNAT1Q9HAN9 279 aaPredicted RBP1.83□□□□□ -2.12
HERC4-215ENST00000515753 LRTM1Q9HBL6 345 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 POPDC3Q9HBV1 291 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 KCNIP2Q9NS61 270 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 FAIMQ9NVQ4 179 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 ZNF586Q9NXT0 402 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 TAS2R1Q9NYW7 299 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 DOK5Q9P104 306 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 ZNF391Q9UJN7 358 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 FAM215AQ9Y5M1 114 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms