RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 DHODHQ02127 395 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 TMEM187Q14656 261 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 KLK9Q2XQG4 91 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 SLC25A42Q86VD7 318 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 CENPSQ8N2Z9 138 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 TEX45Q8NA69 505 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-215ENST00000514660 ZBTB34Q8NCN2 500 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 ZNF486Q96H40 463 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-215ENST00000514660 SCGB3A2Q96PL1 93 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 MARVELD1Q9BSK0 173 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 ZNF436Q9C0F3 470 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-215ENST00000514660 COPZ2Q9P299 210 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
NEDD9-215ENST00000514660 LINC00473A8K010 186 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 INMT-MINDY4F8WBC2 141 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 EREGO14944 169 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 TNFSF12O43508 249 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 IFNA10P01566 189 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 MYOD1P15172 320 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 DUTP33316 252 aaKnown RBP7.52□□□□□ -1.21
NEDD9-215ENST00000514660 ELLP55199 621 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-215ENST00000514660 PIGPP57054 158 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 UBE2KP61086 200 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 SUPT4H1P63272 117 aaKnown RBP7.52□□□□□ -1.21
NEDD9-215ENST00000514660 PLET1Q6UQ28 207 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 SPATA12Q7Z6I5 190 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 TMED4Q7Z7H5 227 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 TMEM190Q8WZ59 177 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 C18orf15Q96N68 181 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 NDUFAF3Q9BU61 184 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 C20orf85Q9H1P6 137 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 SLC2A9Q9NRM0 540 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 NUDT15Q9NV35 164 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 C14orf166Q9Y224 244 aaKnown RBP7.52□□□□□ -1.21
NEDD9-215ENST00000514660 ZNF257Q9Y2Q1 563 aa7.52□□□□□ -1.21
NEDD9-215ENST00000514660 CRYM-AS1A6NIL9 109 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 CGB1A6NKQ9 187 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 ZNF207O43670 478 aaKnown RBP7.51□□□□□ -1.21
NEDD9-215ENST00000514660 SAA1P0DJI8 122 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-215ENST00000514660 AKR1C4P17516 323 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 PSMB6P28072 239 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 GPR183P32249 361 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 TFPI2P48307 235 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 XGP55808 180 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 TRIM16LQ309B1 348 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 SOHLH1Q5JUK2 328 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 ZNF66Q6ZN08 573 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 SSX9Q7RTT3 188 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 TBC1D26Q86UD7 250 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 ZNF502Q8TBZ5 544 aa7.51□□□□□ -1.21
NEDD9-215ENST00000514660 IGLV11-55A0A075B6I3 123 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 A0A0B4J293 547 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 OR4C46A6NHA9 309 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 C15orf61A6NNL5 157 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 NPIPB5A8MRT5 1133 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 ZNF705EA8MWA4 302 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-215ENST00000514660 CRYZL1O95825 349 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 IL5P05113 134 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 CRYGCP07315 174 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 OR4E1P0C645 316 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 C4BPBP20851 252 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 F2RP25116 425 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 PPP1R1AQ13522 171 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 SP6Q3SY56 376 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 TMEM128Q5BJH2 165 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 Q6ZNX1 250 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 KCTD9Q7L273 389 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 CMTM1Q8IZ96 169 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 FAM24BQ8N5W8 94 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 GLYATL2Q8WU03 294 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 EEF1AKMT3Q96AZ1 226 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 TP53RKQ96S44 253 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 RNF2Q99496 336 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 HSD17B10Q99714 261 aaKnown RBP7.5□□□□□ -1.21
NEDD9-215ENST00000514660 SPIN2AQ99865 258 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 SPIN2BQ9BPZ2 258 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 SEC22CQ9BRL7 303 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 NAA60Q9H7X0 242 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 UFC1Q9Y3C8 167 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 HMCN2Q8NDA2 5059 aa7.5□□□□□ -1.21
NEDD9-215ENST00000514660 TEX13DA0A0J9YY54 714 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-215ENST00000514660 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 C9orf170A2RU37 121 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 SFT2D2O95562 160 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 REG1AP05451 166 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 OR5AC1P0C628 307 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 TAS2R31P59538 309 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 UBE2MP61081 183 aaKnown RBP7.49□□□□□ -1.21
NEDD9-215ENST00000514660 DHRS2Q13268 280 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 VMA21Q3ZAQ7 101 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 Q5VSD8 79 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 LEMD1Q68G75 181 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 UBE2DNLQ8IWF7 75 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 VKORC1L1Q8N0U8 176 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 CCDC71LQ8N9Z2 235 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 OR51H1Q8NH63 302 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 TCTEX1D2Q8WW35 142 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 ADTRPQ96IZ2 230 aa7.49□□□□□ -1.21
NEDD9-215ENST00000514660 FYTTD1Q96QD9 318 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms