RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 LINC00205P59089 165 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 TMEM241Q24JQ0 296 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 OR4D5Q8NGN0 318 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 C5orf30Q96GV9 206 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 NABP2Q9BQ15 211 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
HMGCL-209ENST00000513148 PROP1O75360 226 aa13.16□□□□□ -0.3
HMGCL-209ENST00000513148 TUSC2O75896 110 aa13.16□□□□□ -0.3
HMGCL-209ENST00000513148 PPYP01298 95 aa13.16□□□□□ -0.3
HMGCL-209ENST00000513148 TMEM11P17152 192 aa13.16□□□□□ -0.3
HMGCL-209ENST00000513148 BAXQ07812 192 aa13.16□□□□□ -0.3
HMGCL-209ENST00000513148 FAM71F2Q6NXP2 309 aa13.16□□□□□ -0.3
HMGCL-209ENST00000513148 THNSL2Q86YJ6 484 aa13.16□□□□□ -0.3
HMGCL-209ENST00000513148 ZNF2Q9BSG1 426 aaPredicted RBP13.16□□□□□ -0.3
HMGCL-209ENST00000513148 FAM90A9PA6NNJ1 464 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 CT45A6P0DMU7 189 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 CT45A5P0DMU8 189 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 CT45A7P0DMV0 189 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 OR10J1P30954 320 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 SRPXP78539 464 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 DTD1Q8TEA8 209 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 SLC25A33Q9BSK2 321 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 CD1BP29016 333 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 UCP3P55916 312 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 HERV-K104P61576 105 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 RELBQ01201 579 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 ZNF645Q8N7E2 425 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.15□□□□□ -0.3
HMGCL-209ENST00000513148 MDFIQ99750 246 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 C20orf144Q9BQM9 153 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 C1RLQ9NZP8 487 aa13.15□□□□□ -0.3
HMGCL-209ENST00000513148 TYMSP04818 313 aa13.14□□□□□ -0.31
HMGCL-209ENST00000513148 RANP62826 216 aaKnown RBP13.14□□□□□ -0.31
HMGCL-209ENST00000513148 EAF1Q96JC9 268 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-209ENST00000513148 BTF3L4Q96K17 158 aa13.14□□□□□ -0.31
HMGCL-209ENST00000513148 PIGPP57054 158 aa13.13□□□□□ -0.31
HMGCL-209ENST00000513148 OR2T10Q8NGZ9 312 aa13.13□□□□□ -0.31
HMGCL-209ENST00000513148 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
HMGCL-209ENST00000513148 MOSP00540 346 aa13.13□□□□□ -0.31
HMGCL-209ENST00000513148 NPSP0C0P6 89 aa13.13□□□□□ -0.31
HMGCL-209ENST00000513148 TEX38Q6PEX7 206 aa13.13□□□□□ -0.31
HMGCL-209ENST00000513148 GPHA2Q96T91 129 aa13.13□□□□□ -0.31
HMGCL-209ENST00000513148 CCL28Q9NRJ3 127 aa13.13□□□□□ -0.31
HMGCL-209ENST00000513148 LYRM2Q9NU23 88 aaPredicted RBP13.13□□□□□ -0.31
HMGCL-209ENST00000513148 SH2D7A6NKC9 451 aaPredicted RBP13.12□□□□□ -0.31
HMGCL-209ENST00000513148 H0YJW9 148 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 TNFSF12O43508 249 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 IGLV2-14P01704 120 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 RPL15P61313 204 aaKnown RBP13.12□□□□□ -0.31
HMGCL-209ENST00000513148 CMTM1Q8IZ96 169 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 MBD3L1Q8WWY6 194 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 SPIN2AQ99865 258 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 SPIN2BQ9BPZ2 258 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 NPFFR1Q9GZQ6 430 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 FKBP11Q9NYL4 201 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 NCBP2LA6PVI3 153 aaKnown RBP13.12□□□□□ -0.31
HMGCL-209ENST00000513148 BCL2P10415 239 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 TAS2R30P59541 319 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 Q6ZSV7 163 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 LYZL2Q7Z4W2 148 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 GBGT1Q8N5D6 347 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 OR51G1Q8NGK1 321 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 MOB3AQ96BX8 217 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 GAB2Q9UQC2 676 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 MOB4Q9Y3A3 225 aa13.12□□□□□ -0.31
HMGCL-209ENST00000513148 A0A1B0GV50 99 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 CEBPGP53567 150 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 BLCAPP62952 87 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 EBI3Q14213 229 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 ABCA11PQ4W5N1 156 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 ACTL10Q5JWF8 245 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 C16orf82Q7Z2V1 217 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 OR4C13Q8NGP0 309 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 RITA1Q96K30 269 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 MIEN1Q9BRT3 115 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 NAT8Q9UHE5 227 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 WASHC3Q9Y3C0 194 aa13.11□□□□□ -0.31
HMGCL-209ENST00000513148 COL6A5A8TX70 2615 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 LINC00473A8K010 186 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 APOA2P02652 100 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 MDKP21741 143 aaPredicted RBP13.1□□□□□ -0.31
HMGCL-209ENST00000513148 CNTFRP26992 372 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 DUTP33316 252 aaKnown RBP13.1□□□□□ -0.31
HMGCL-209ENST00000513148 MMDQ15546 238 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
HMGCL-209ENST00000513148 ZNF66Q6ZN08 573 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 ZNF818PQ6ZRF7 136 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 MRPL41Q8IXM3 137 aaKnown RBP13.1□□□□□ -0.31
HMGCL-209ENST00000513148 Q8N6K4 173 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 TMEM252Q8N6L7 170 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 CCDC71LQ8N9Z2 235 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 OR5AN1Q8NGI8 311 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 SLC35D1Q9NTN3 355 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 NAGKQ9UJ70 344 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 ZFP30Q9Y2G7 519 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 SIGLEC9Q9Y336 463 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 IGKV1-16P04430 117 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 MC5RP33032 325 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms