RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TCTAP57738 103 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 DAD1P61803 113 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 PMCHL1Q16048 86 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 TCF23Q7RTU1 214 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 VCX2Q9H322 139 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 UNC13CQ8NB66 2214 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 TEX48A0A1B0GUV7 120 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 A0A1B0GWJ7 208 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 F2Z2F3 143 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 LMO1P25800 156 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 MST1LQ2TV78 715 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 C1QL2Q7Z5L3 287 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 OR4D5Q8NGN0 318 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 SCGB3A1Q96QR1 104 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 WFDC6Q9BQY6 131 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 C5orf66Q9H5L9 145 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 A0A1B0GUT8 65 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 C7orf77A4D0Y5 90 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 ITGB1BP1O14713 200 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 LEPROTL1O95214 131 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 VENTXO95231 258 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 ZNF79Q15937 498 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 TMEM88Q6PEY1 159 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 TMEM86BQ8N661 226 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 OR10D4PQ8NGN7 298 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 Q8TCH9 128 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 NCOR1P1Q9H4R4 102 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 MLNRO43193 412 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 IGFBP3P17936 291 aaPredicted RBP3.5□□□□□ -1.85
VCAN-209ENST00000513016 CFHR2P36980 270 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 GATA4P43694 442 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 GAS1P54826 345 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 FAM90A2PQ658T7 463 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 NPCDR1Q9BY65 106 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 TSSC4Q9Y5U2 329 aaPredicted RBP3.5□□□□□ -1.85
VCAN-209ENST00000513016 CDK2AP2O75956 126 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 RNASE1P07998 156 aaKnown RBP3.5□□□□□ -1.85
VCAN-209ENST00000513016 SEC11AP67812 179 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 SLAQ13239 276 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 TMEM170BQ5T4T1 132 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 GLMPQ8WWB7 406 aa3.5□□□□□ -1.85
VCAN-209ENST00000513016 SPATA31B1PQ5VZV4 182 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 DAZ1Q9NQZ3 744 aaKnown RBP3.49□□□□□ -1.85
VCAN-209ENST00000513016 KIF13BQ9NQT8 1826 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 TGIF2-C20orf24A0A0A6YYL0 155 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 CD55P08174 381 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 MUC21Q5SSG8 566 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 RPP21Q9H633 154 aaKnown RBP3.49□□□□□ -1.85
VCAN-209ENST00000513016 RFNGQ9Y644 331 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 PLA2G10O15496 165 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 C1QCP02747 245 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 PPBPP02775 128 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 SOD3P08294 240 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 DAZAP2Q15038 168 aaPredicted RBP3.49□□□□□ -1.85
VCAN-209ENST00000513016 LBHQ53QV2 105 aaPredicted RBP3.49□□□□□ -1.85
VCAN-209ENST00000513016 CENPWQ5EE01 88 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 OR11H1Q8NG94 326 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 OR11H2Q8NH07 326 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 FGFBP3Q8TAT2 258 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 LYZL4Q96KX0 146 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 PSG8Q9UQ74 426 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 PSG1P11464 419 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 KLK15Q9H2R5 256 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 SCN3AQ9NY46 2000 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 TRGV1A0A0A0MS02 117 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 PRR32B1ATL7 298 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 FGF16O43320 207 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 SCGB1A1P11684 91 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 FOXG1P55316 489 aaPredicted RBP3.49□□□□□ -1.85
VCAN-209ENST00000513016 HGFACQ04756 655 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 ACTL10Q5JWF8 245 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 FOXL2NBQ6ZUU3 175 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 NEUROG1Q92886 237 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 TRGV9Q99603 122 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 SLX1AQ9BQ83 275 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 TRIOBPQ9H2D6 2365 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 TRAV9-1A0A075B6T8 112 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 A0A087WV48 116 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 H3BUA1 57 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 EFNA2O43921 213 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 TMEM50AO95807 157 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 RHPN1-AS1Q9BWJ2 59 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 DKK4Q9UBT3 224 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 SIGLEC9Q9Y336 463 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 F11RQ9Y624 299 aaKnown RBP3.49□□□□□ -1.85
VCAN-209ENST00000513016 A0A1B0GVG6 124 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 H3BVH4 76 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 CKS1BP61024 79 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 SUPT4H1P63272 117 aaKnown RBP3.49□□□□□ -1.85
VCAN-209ENST00000513016 ZNF562Q6V9R5 426 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 TMEM136Q6ZRR5 245 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 ZNF329Q86UD4 541 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 CD177Q8N6Q3 437 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 GPHA2Q96T91 129 aa3.49□□□□□ -1.85
VCAN-209ENST00000513016 A0A1W2PRE2 83 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 GZMBP10144 247 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 FOLR2P14207 255 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 GCSAMLQ5JQS6 135 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 Q71RC1 249 aaPredicted RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 BIVMQ86UB2 503 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms