RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 IGF2BP2-AS1Q96M15 143 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 BOD1L1Q8NFC6 3051 aa7.45□□□□□ -1.22
CPNE4-210ENST00000512332 A8MWP6 167 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 RBP4P02753 201 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 BPIFB3P59826 476 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 Q0VG73 95 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 OR5I1Q13606 314 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 C10orf113Q5VZT2 155 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 WDR73Q6P4I2 378 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 SPACA3Q8IXA5 215 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 ZNF664Q8N3J9 261 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 STXBP6Q8NFX7 210 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 NPIPB3Q92617 1050 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 MRPL18Q9H0U6 180 aaKnown RBP7.44□□□□□ -1.22
CPNE4-210ENST00000512332 ACACAQ13085 2346 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 MGAQ8IWI9 3026 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 K7ENP7 123 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 COX7A2P2O60397 106 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 IGLV1-47P01700 117 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 CRYGBP07316 175 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 CBLN1P23435 193 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 PRRX1P54821 245 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 CASP6P55212 293 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 RAB4BP61018 213 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 UBE2L3P68036 154 aaKnown RBP7.44□□□□□ -1.22
CPNE4-210ENST00000512332 PATE2Q6UY27 113 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 TMEM256Q8N2U0 113 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 BEND2Q8NDZ0 799 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 OR5AU1Q8NGC0 362 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 OR1L6Q8NGR2 347 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 SH3BGRL2Q9UJC5 107 aa7.44□□□□□ -1.22
CPNE4-210ENST00000512332 RALYQ9UKM9 306 aaKnown RBP7.44□□□□□ -1.22
CPNE4-210ENST00000512332 A0A1W2PPI3 338 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 SMIM27A0A1W2PRY6 76 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 IGLC7A0M8Q6 106 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 FCN1O00602 326 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 SLC25A17O43808 307 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 CD3EP07766 207 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 CRISP2P16562 243 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 RANP62826 216 aaKnown RBP7.43□□□□□ -1.22
CPNE4-210ENST00000512332 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-210ENST00000512332 C10orf55Q5SWW7 151 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 MORN5Q5VZ52 161 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 FAM231DQ6ZW35 169 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 TMEM116Q8NCL8 245 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 TRGV9Q99603 122 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 PAXXQ9BUH6 204 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 ZNF355PQ9NSJ1 428 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 ROS1P08922 2347 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 TRAV5A0A0B4J249 113 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 CORTO00230 105 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 COMPP49747 757 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-210ENST00000512332 OR8I2Q8N0Y5 310 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 CMTM2Q8TAZ6 248 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 RNF5Q99942 180 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 PRO1933Q9H354 126 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 TP53TG3Q9ULZ0 132 aa7.43□□□□□ -1.22
CPNE4-210ENST00000512332 AMMECR1Q9Y4X0 333 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-210ENST00000512332 GVINP1Q7Z2Y8 2422 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 ANKRD11Q6UB99 2663 aaPredicted RBP7.42□□□□□ -1.22
CPNE4-210ENST00000512332 ZFHX2Q9C0A1 2572 aaPredicted RBP7.42□□□□□ -1.22
CPNE4-210ENST00000512332 IGHV2-26A0A0B4J1V2 119 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 ZNF705GA8MUZ8 300 aaPredicted RBP7.42□□□□□ -1.22
CPNE4-210ENST00000512332 NUPR1O60356 82 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 MYCNOSP40205 109 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 IER3P46695 156 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 SSBP2P81877 361 aaPredicted RBP7.42□□□□□ -1.22
CPNE4-210ENST00000512332 FBXL19-AS1Q494R0 122 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 IBA57Q5T440 356 aaKnown RBP7.42□□□□□ -1.22
CPNE4-210ENST00000512332 RASL11AQ6T310 242 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 ZNF841Q6ZN19 808 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 ST6GALNAC3Q8NDV1 305 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 FXYD5Q96DB9 178 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 SMIM12Q96EX1 92 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 RITA1Q96K30 269 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 MS4A10Q96PG2 267 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 ARFGEF3Q5TH69 2177 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 AKAP13Q12802 2813 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 SNURFLB1AK76 121 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 LINC00310P59036 64 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 TPPP2P59282 170 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 PLP1P60201 277 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 ZNF329Q86UD4 541 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 C8orf46Q8TAG6 207 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 C22orf15Q8WYQ4 148 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 PERPQ96FX8 193 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 NDUFAF3Q9BU61 184 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
CPNE4-210ENST00000512332 TPSG1Q9NRR2 321 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 TNFRSF19Q9NS68 423 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 SIGLEC9Q9Y336 463 aa7.42□□□□□ -1.22
CPNE4-210ENST00000512332 PCNX1Q96RV3 2341 aa7.41□□□□□ -1.22
CPNE4-210ENST00000512332 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.41□□□□□ -1.22
CPNE4-210ENST00000512332 BUB1B-PAK6H3BSN5 160 aa7.41□□□□□ -1.22
CPNE4-210ENST00000512332 RPL27AP46776 148 aaKnown RBP7.41□□□□□ -1.22
CPNE4-210ENST00000512332 PRR30Q53SZ7 412 aaPredicted RBP7.41□□□□□ -1.22
CPNE4-210ENST00000512332 OR10J3Q5JRS4 329 aa7.41□□□□□ -1.22
CPNE4-210ENST00000512332 TMEM136Q6ZRR5 245 aa7.41□□□□□ -1.22
CPNE4-210ENST00000512332 LINC00305Q7Z4B0 112 aa7.41□□□□□ -1.22
CPNE4-210ENST00000512332 CLEC7AQ9BXN2 247 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms