RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 MCFD2Q8NI22 146 aa9.03□□□□□ -0.96
CLDND1-223ENST00000511081 C20orf24Q9BUV8 137 aa9.03□□□□□ -0.96
CLDND1-223ENST00000511081 HYDINQ4G0P3 5121 aa9.03□□□□□ -0.96
CLDND1-223ENST00000511081 LOC102724200A0A096LPH7 203 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-223ENST00000511081 CORTO00230 105 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 IGHV3-48P01763 117 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 TMEM187Q14656 261 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 TOMM20LQ6UXN7 152 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 DUSP18Q8NEJ0 188 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 IL22RA2Q969J5 263 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 TMEM230Q96A57 120 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 PINX1Q96BK5 328 aaKnown RBP9.02□□□□□ -0.97
CLDND1-223ENST00000511081 GPR146Q96CH1 333 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 SCGB3A2Q96PL1 93 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 FNDC4Q9H6D8 234 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-223ENST00000511081 SCP2D1Q9UJQ7 156 aa9.02□□□□□ -0.97
CLDND1-223ENST00000511081 IGHV3OR16-8A0A075B7F1 116 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 TRAV14DV4A0A0A6YYC5 116 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 ZNF207O43670 478 aaKnown RBP9.01□□□□□ -0.97
CLDND1-223ENST00000511081 GNG7O60262 68 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 NOL3O60936 208 aaKnown RBP9.01□□□□□ -0.97
CLDND1-223ENST00000511081 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
CLDND1-223ENST00000511081 MLANAQ16655 118 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 ODF3L2Q3SX64 289 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 TMEM268Q5VZI3 342 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 OR4X1Q8NH49 305 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 RNF2Q99496 336 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 PDCD10Q9BUL8 212 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 RBM38Q9H0Z9 239 aaKnown RBP9.01□□□□□ -0.97
CLDND1-223ENST00000511081 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 RETNQ9HD89 108 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 MRPL36Q9P0J6 103 aaKnown RBP9.01□□□□□ -0.97
CLDND1-223ENST00000511081 CACFD1Q9UGQ2 172 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 KCNIP3Q9Y2W7 256 aa9.01□□□□□ -0.97
CLDND1-223ENST00000511081 OR4C46A6NHA9 309 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 CLN5O75503 358 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 CD5P06127 495 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 HTR2BP41595 481 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 KLF9Q13886 244 aaPredicted RBP9□□□□□ -0.97
CLDND1-223ENST00000511081 C2orf83Q53S99 150 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 NMSQ5H8A3 153 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 ZNF600Q6ZNG1 722 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 WFDC3Q8IUB2 231 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 DEDD2Q8WXF8 326 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 TRIM63Q969Q1 353 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 OVOL2Q9BRP0 275 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 V9GYH0 126 aa9□□□□□ -0.97
CLDND1-223ENST00000511081 KIR2DL5BA0A0G2JN68 375 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 KIR2DL5BA0A0G2JPC4 375 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 A0A1B0GU03 582 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 ZNF701M0R085 212 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-223ENST00000511081 YIF1AO95070 293 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 IGKV1-17P01599 117 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 CMC4P56277 68 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-223ENST00000511081 ZNF79Q15937 498 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 Q6ZWC4 215 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 CCDC190Q86UF4 302 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 KIR2DL5AQ8N109 375 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 LILRB2Q8N423 598 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 KIR2DL5BQ8NHK3 375 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 TMEM170AQ8WVE7 144 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 GINS3Q9BRX5 216 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 ENY2Q9NPA8 101 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 CACNG5Q9UF02 275 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 TP53TG1Q9Y2A0 90 aa8.99□□□□□ -0.97
CLDND1-223ENST00000511081 PUS1Q9Y606 427 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLDND1-223ENST00000511081 TRAV30A0A087WSZ9 112 aa8.98□□□□□ -0.97
CLDND1-223ENST00000511081 A0A0B4J2A0 478 aa8.98□□□□□ -0.97
CLDND1-223ENST00000511081 UBE2CO00762 179 aa8.98□□□□□ -0.97
CLDND1-223ENST00000511081 APOHP02749 345 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-223ENST00000511081 SULT1A3P0DMM9 295 aa8.98□□□□□ -0.97
CLDND1-223ENST00000511081 SULT1A4P0DMN0 295 aa8.98□□□□□ -0.97
CLDND1-223ENST00000511081 HOXA1P49639 335 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-223ENST00000511081 RNASE11Q8TAA1 199 aaKnown RBP8.98□□□□□ -0.97
CLDND1-223ENST00000511081 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
CLDND1-223ENST00000511081 RNASEH2CQ8TDP1 164 aaKnown RBP8.98□□□□□ -0.97
CLDND1-223ENST00000511081 HEYLQ9NQ87 328 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-223ENST00000511081 SHPKQ9UHJ6 478 aa8.98□□□□□ -0.97
CLDND1-223ENST00000511081 ALMS1Q8TCU4 4167 aa8.98□□□□□ -0.97
CLDND1-223ENST00000511081 IGHV3-49A0A0A0MS15 119 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 TRAV2A0A0B4J234 112 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 CRYBB3P26998 211 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 CCR6P51684 374 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 APOC4P55056 127 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 TMEM128Q5BJH2 165 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 ZFAND6Q6FIF0 208 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 PRSS54Q6PEW0 395 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 LYZL2Q7Z4W2 148 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 MCUBQ9NWR8 336 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 HSPB7Q9UBY9 170 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 UBQLN2Q9UHD9 624 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 U3KQE9 123 aa8.97□□□□□ -0.97
CLDND1-223ENST00000511081 LCE6AA0A183 80 aa8.96□□□□□ -0.98
CLDND1-223ENST00000511081 RPS10-NUDT3A0A1W2PQS6 291 aa8.96□□□□□ -0.98
CLDND1-223ENST00000511081 PITX3O75364 302 aa8.96□□□□□ -0.98
CLDND1-223ENST00000511081 IGLC1P0CG04 106 aa8.96□□□□□ -0.98
CLDND1-223ENST00000511081 SLC25A4P12235 298 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms