RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 RNF183Q96D59 192 aa7.48□□□□□ -1.21
UBE2D3-227ENST00000508818 NARS2Q96I59 477 aaKnown RBP7.48□□□□□ -1.21
UBE2D3-227ENST00000508818 OR10C1Q96KK4 312 aa7.48□□□□□ -1.21
UBE2D3-227ENST00000508818 MRPS26Q9BYN8 205 aaKnown RBP7.48□□□□□ -1.21
UBE2D3-227ENST00000508818 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
UBE2D3-227ENST00000508818 MAP6D1Q9H9H5 199 aa7.48□□□□□ -1.21
UBE2D3-227ENST00000508818 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.48□□□□□ -1.21
UBE2D3-227ENST00000508818 IGHV3-66A0A0C4DH42 116 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 A0A1W2PS18 150 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 INS-IGF2F8WCM5 200 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 CTDSP2O14595 271 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 TMEM50AO95807 157 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 SMIM18P0DKX4 95 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 NPPCP23582 126 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 UCP1P25874 307 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 OPRK1P41145 380 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 SPCS3P61009 180 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 DHODHQ02127 395 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 TNFRSF9Q07011 255 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 IL18Q14116 193 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 CLVS1Q8IUQ0 354 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 FAM219AQ8IW50 185 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 DIRAS2Q96HU8 199 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 CSTL1Q9H114 145 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 HEYLQ9NQ87 328 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 RABL2AQ9UBK7 228 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 RABL2BQ9UNT1 228 aa7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 PUS1Q9Y606 427 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBE2D3-227ENST00000508818 TRAV30A0A087WSZ9 112 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 RPS10-NUDT3A0A1W2PQS6 291 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 NUPR2A6NF83 97 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 CEBPZOSA8MTT3 80 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 NOL3O60936 208 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 CLN5O75503 358 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 DFFBO76075 338 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 OR5AC1P0C628 307 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 P0C879 139 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 AKAIN1P0CW23 69 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 RNASE2P10153 161 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 HTR2BP41595 481 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 SURF2Q15527 256 aaPredicted RBP7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 ST8SIA2Q92186 375 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 GRAMD2BQ96HH9 432 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 SCGB3A2Q96PL1 93 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 METTL26Q96S19 204 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 PRRT1Q99946 306 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 TMEM222Q9H0R3 208 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 MIXL1Q9H2W2 232 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 NAA60Q9H7X0 242 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 RABAC1Q9UI14 185 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 KCNIP3Q9Y2W7 256 aa7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.22
UBE2D3-227ENST00000508818 CDS2O95674 445 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 APOHP02749 345 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 RPL5P46777 297 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 SPCS2Q15005 226 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 ZNF124Q15973 351 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 TMEM268Q5VZI3 342 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 FAM90A2PQ658T7 463 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 FAAP20Q6NZ36 180 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 OR4X1Q8NH49 305 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 OR52E5Q8NH55 327 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 RAB2BQ8WUD1 216 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 GATAD1Q8WUU5 269 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 SMIM4Q8WVI0 70 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 RBPMSQ93062 196 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 RARRES2Q99969 163 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 RTBDNQ9BSG5 229 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 MS4A6AQ9H2W1 248 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 VSIRQ9H7M9 311 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 CACFD1Q9UGQ2 172 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 SCP2D1Q9UJQ7 156 aa7.45□□□□□ -1.22
UBE2D3-227ENST00000508818 RYR2Q92736 4967 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 A0A0G2JRQ6 117 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 A0A1B0GU03 582 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 LY6G6CO95867 125 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 ALDH3B2P48448 385 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 EIF2B2P49770 351 aaKnown RBP7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 DEFB131AP59861 70 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 MLANAQ16655 118 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 TIGITQ495A1 244 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 ETFRF1Q6IPR1 90 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 Q6ZRM9 215 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 NOXA1Q86UR1 476 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 SELENOHQ8IZQ5 122 aaKnown RBP7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 STXBP6Q8NFX7 210 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 Q8WTZ3 238 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 GLYATL2Q8WU03 294 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 MCUBQ9NWR8 336 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 CACNG5Q9UF02 275 aa7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 RSL24D1Q9UHA3 163 aaKnown RBP7.44□□□□□ -1.22
UBE2D3-227ENST00000508818 TRAV2A0A0B4J234 112 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 CRYM-AS1A6NIL9 109 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 CTDSPLO15194 276 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 CA1P00915 261 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 SULT1A3P0DMM9 295 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 SULT1A4P0DMN0 295 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 SLC25A4P12235 298 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 ATF4P18848 351 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms