RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 C11orf52Q96A22 123 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 TIMM23O14925 209 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 NDUFS7O75251 213 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 HTR1DP28221 377 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 TAS2R45P59539 299 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 KLRD1Q13241 179 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 MRPL41Q8IXM3 137 aaKnown RBP17.99■□□□□ 0.47
PCDH1-204ENST00000503492 MISP3Q96FF7 219 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 C12orf57Q99622 126 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 ARL2-SNX15V9GYD0 113 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 M0R1W7 72 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 CRYGCP07315 174 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 C8orf88P0DMB2 117 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 GNLYP22749 145 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 S100PP25815 95 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 C4orf17Q53FE4 359 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 DNAJC4Q9NNZ3 241 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 TEX22C9J3V5 150 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 FCN1O00602 326 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 TGOLN2O43493 480 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 CLEC12BQ2HXU8 276 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 FRZBQ92765 325 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 FAM167A-AS1Q96KT0 104 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 UHRF2Q96PU4 802 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 MRPL32Q9BYC8 188 aaKnown RBP17.98■□□□□ 0.47
PCDH1-204ENST00000503492 DPM3Q9P2X0 92 aa17.98■□□□□ 0.47
PCDH1-204ENST00000503492 TRAV5A0A0B4J249 113 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 PHOX2AO14813 284 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 OR10J4P0C629 311 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 NDUFA6P56556 154 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 RNF5Q99942 180 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 MEOX2P50222 304 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 IGFBPL1Q8WX77 278 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 SLC25A2Q9BXI2 301 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 HILPDAQ9Y5L2 63 aa17.97■□□□□ 0.47
PCDH1-204ENST00000503492 CD99P14209 185 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 LGALS4P56470 323 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 PATE2Q6UY27 113 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 LHFPL4Q7Z7J7 247 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 OCC1Q8TAD7 63 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 RNF2Q99496 336 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 SRD5A3Q9H8P0 318 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 UBTD1Q9HAC8 227 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 TRGC1P0CF51 173 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 HOXA5P20719 270 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 PRTN3P24158 256 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 GPR6P46095 362 aaPredicted RBP17.96■□□□□ 0.47
PCDH1-204ENST00000503492 ETFRF1Q6IPR1 90 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 OR1P1Q8NH06 330 aa17.96■□□□□ 0.47
PCDH1-204ENST00000503492 ODF3BA8MYP8 253 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 C19orf84I3L1E1 186 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 COX7A2P2O60397 106 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 HNF1AP20823 631 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 OR4X1Q8NH49 305 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 SRSF12Q8WXF0 261 aaKnown RBP17.95■□□□□ 0.46
PCDH1-204ENST00000503492 CFHR4Q92496 578 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 A0A1W2PPQ1 181 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 SRP14P37108 136 aaKnown RBP17.95■□□□□ 0.46
PCDH1-204ENST00000503492 SELENOTP62341 195 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 DMRT1Q9Y5R6 373 aa17.95■□□□□ 0.46
PCDH1-204ENST00000503492 IGHV3-21A0A0B4J1V1 117 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 A6NNC1 897 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 GGCTO75223 188 aaKnown RBP17.94■□□□□ 0.46
PCDH1-204ENST00000503492 C10orf113Q5VZT2 155 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 OR1L4Q8NGR5 311 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 SFRP2Q96HF1 295 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 PFDN5Q99471 154 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 F11RQ9Y624 299 aaKnown RBP17.94■□□□□ 0.46
PCDH1-204ENST00000503492 ITPR1Q14643 2758 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 A0A1W2PRD5 423 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 A0A1W2PRF3 423 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 A0A1W2PRM7 423 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 GGTLC3B5MD39 225 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 MOSP00540 346 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 S100A8P05109 93 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 PLGLAQ15195 96 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 OR2T10Q8NGZ9 312 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 TNFRSF19Q9NS68 423 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 ZNF355PQ9NSJ1 428 aa17.94■□□□□ 0.46
PCDH1-204ENST00000503492 ZFP36P26651 326 aaKnown RBP17.93■□□□□ 0.46
PCDH1-204ENST00000503492 CRYBB3P26998 211 aa17.93■□□□□ 0.46
PCDH1-204ENST00000503492 MMDQ15546 238 aa17.93■□□□□ 0.46
PCDH1-204ENST00000503492 OR5AU1Q8NGC0 362 aa17.93■□□□□ 0.46
PCDH1-204ENST00000503492 CEACAM3P40198 252 aa17.93■□□□□ 0.46
PCDH1-204ENST00000503492 MDFIC2A0A1B0GVS7 189 aa17.92■□□□□ 0.46
PCDH1-204ENST00000503492 C9JCJ5 164 aa17.92■□□□□ 0.46
PCDH1-204ENST00000503492 K7EN84 100 aa17.92■□□□□ 0.46
PCDH1-204ENST00000503492 PPP1R2P9O14990 202 aa17.92■□□□□ 0.46
PCDH1-204ENST00000503492 CD24P25063 80 aa17.92■□□□□ 0.46
PCDH1-204ENST00000503492 FAM3BP58499 235 aaPredicted RBP17.92■□□□□ 0.46
PCDH1-204ENST00000503492 BPIFB3P59826 476 aa17.92■□□□□ 0.46
PCDH1-204ENST00000503492 TMEM116Q8NCL8 245 aa17.92■□□□□ 0.46
PCDH1-204ENST00000503492 A0A1W2PRE2 83 aa17.91■□□□□ 0.46
PCDH1-204ENST00000503492 PPP5D1E7EU14 171 aa17.91■□□□□ 0.46
PCDH1-204ENST00000503492 FBLN7Q53RD9 439 aa17.91■□□□□ 0.46
PCDH1-204ENST00000503492 CORTO00230 105 aa17.91■□□□□ 0.46
PCDH1-204ENST00000503492 SUMO1P63165 101 aaKnown RBP17.91■□□□□ 0.46
PCDH1-204ENST00000503492 UBE2L3P68036 154 aaKnown RBP17.91■□□□□ 0.46
PCDH1-204ENST00000503492 PAX2Q02962 417 aa17.91■□□□□ 0.46
PCDH1-204ENST00000503492 TEX38Q6PEX7 206 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms