RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 I3L2K1 104 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 CLN5O75503 358 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 IGHV4-59P01825 116 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 H2AFB1P0C5Y9 115 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 FCGR2BP31994 310 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 RND2P52198 227 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 MFAP2P55001 183 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 MFAP4P55083 255 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 RPL15P61313 204 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 ZNF616Q08AN1 781 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 ECSCRQ19T08 205 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 C9orf152Q5JTZ5 239 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 FAM209BQ5JX69 171 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 FFAR4Q5NUL3 377 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 ACSM6Q6P461 480 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 S100A7AQ86SG5 101 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 NECAP1Q8NC96 275 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 LYPD6BQ8NI32 183 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 FAM213BQ8TBF2 198 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 NPIPB3Q92617 1050 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 ACY3Q96HD9 319 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 FANCD2OSQ96PS1 177 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 RNF2Q99496 336 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 MGST2Q99735 147 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 ACTR3CQ9C0K3 210 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 SLC45A2Q9UMX9 530 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 SOX21Q9Y651 276 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 PXMP4Q9Y6I8 212 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 TACC2O95359 2948 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 GCN1Q92616 2671 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 TRBV7-1A0A0A6YYK4 115 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 TRBV9A0A0B4J1U6 114 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 TRAV1-1A0A0B4J248 108 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 A0A1W2PPV4 95 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 TMEM89A2RUT3 159 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 RAB19A4D1S5 217 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 FAM223BA6NKX1 122 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 CLDN34H7C241 214 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 K7EIM0 57 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 HOXA3O43365 443 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 APELAP0DMC3 54 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 CD99P14209 185 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 SRD5A1P18405 259 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 OR10J1P30954 320 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 S100A7P31151 101 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 PRR20EP86478 221 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 PRR20CP86479 221 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 PRR20DP86480 221 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 PRR20BP86481 221 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 PRR20AP86496 221 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 C19orf54Q5BKX5 351 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 UQCC3Q6UW78 93 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 CYP2G1PQ6ZSU1 146 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 FAM223AQ8IWN6 122 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 EIF4E3Q8N5X7 224 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 STPG3Q8N7X2 389 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 SIGLECL1Q8N7X8 197 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 OR5T1Q8NG75 326 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 OR10G4Q8NGN3 311 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 OR10G9Q8NGN4 311 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 OR10G7Q8NGN6 311 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 OR1L4Q8NGR5 311 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 OR2T6Q8NHC8 308 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 MARC2Q969Z3 335 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 USMG5Q96IX5 58 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 JMJD8Q96S16 334 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 PFDN5Q99471 154 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 RPRMQ9NS64 109 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 TNFRSF19Q9NS68 423 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 ZNF355PQ9NSJ1 428 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 SLC39A9Q9NUM3 307 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 C21orf62Q9NYP8 219 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 RNF24Q9Y225 148 aa6.39□□□□□ -1.39
TOPBP1-202ENST00000503338 ELOA3CA0A087WX78 387 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 A0A0G2JLM5 398 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 CTXND1A0A1B0GTU2 59 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 SEC14L6B5MCN3 397 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 GNG7O60262 68 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 TAGLN2P37802 199 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 CDC34P49427 236 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 PPT1P50897 306 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 ELLP55199 621 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 RHOBP62745 196 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 SLC35B1P78383 322 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 MLANAQ16655 118 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 MIC13Q5XKP0 118 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 COMMD7Q86VX2 200 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 BPIFCQ8NFQ6 507 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 ZNF418Q8TF45 676 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 GATAD1Q8WUU5 269 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 MBD3L1Q8WWY6 194 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 EEF1AKMT3Q96AZ1 226 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 PBDC1Q9BVG4 233 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 HRH4Q9H3N8 390 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 SMDT1Q9H4I9 107 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 PLA2G2EQ9NZK7 142 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 FBXL7Q9UJT9 491 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 DMRT1Q9Y5R6 373 aa6.38□□□□□ -1.39
TOPBP1-202ENST00000503338 NBPF19A0A087WUL8 3843 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 IGKV1OR2-108A0A075B7D4 117 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms