RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 P0C879 139 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 NPPCP23582 126 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 UCP1P25874 307 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 SPCS3P61009 180 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 FAM90A2PQ658T7 463 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 LINC00476Q8WZB0 136 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 RARRES2Q99969 163 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.69□□□□□ -0.7
HDLBP-247ENST00000498595 STARD9Q9P2P6 4700 aa10.69□□□□□ -0.7
HDLBP-247ENST00000498595 TRAV30A0A087WSZ9 112 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 TRAV2A0A0B4J234 112 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 IGHV3-66A0A0C4DH42 116 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 CLN5O75503 358 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 RNASE2P10153 161 aaKnown RBP10.68□□□□□ -0.7
HDLBP-247ENST00000498595 HTR2BP41595 481 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 EIF2B2P49770 351 aaKnown RBP10.68□□□□□ -0.7
HDLBP-247ENST00000498595 DHODHQ02127 395 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 GRAMD2BQ96HH9 432 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 MRPS26Q9BYN8 205 aaKnown RBP10.68□□□□□ -0.7
HDLBP-247ENST00000498595 TMEM222Q9H0R3 208 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 MS4A6AQ9H2W1 248 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 VSIRQ9H7M9 311 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 HEYLQ9NQ87 328 aaPredicted RBP10.68□□□□□ -0.7
HDLBP-247ENST00000498595 RABL2AQ9UBK7 228 aaPredicted RBP10.68□□□□□ -0.7
HDLBP-247ENST00000498595 CACFD1Q9UGQ2 172 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 RABAC1Q9UI14 185 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 RABL2BQ9UNT1 228 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 RYR2Q92736 4967 aa10.68□□□□□ -0.7
HDLBP-247ENST00000498595 CA1P00915 261 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-247ENST00000498595 OR5AC1P0C628 307 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 SMIM18P0DKX4 95 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 RPL5P46777 297 aaKnown RBP10.67□□□□□ -0.7
HDLBP-247ENST00000498595 SURF2Q15527 256 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-247ENST00000498595 ZNF124Q15973 351 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 PVRIGQ6DKI7 326 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 STHQ8IWL8 128 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 OR4X1Q8NH49 305 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 OR52E5Q8NH55 327 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 RBPMSQ93062 196 aaKnown RBP10.67□□□□□ -0.7
HDLBP-247ENST00000498595 ZNF414Q96IQ9 312 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 MFFQ9GZY8 342 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 NAA60Q9H7X0 242 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 LYSTQ99698 3801 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 DNAH1Q9P2D7 4330 aa10.67□□□□□ -0.7
HDLBP-247ENST00000498595 A0A1B0GU03 582 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 CEBPZOSA8MTT3 80 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 CDS2O95674 445 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 APOHP02749 345 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-247ENST00000498595 AKAIN1P0CW23 69 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 DEFB131AP59861 70 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 EWSR1Q01844 656 aaKnown RBP eCLIP10.66□□□□□ -0.7
HDLBP-247ENST00000498595 IL18Q14116 193 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 TMEM187Q14656 261 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 LEMD1Q68G75 181 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 NOXA1Q86UR1 476 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 STXBP6Q8NFX7 210 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 OR11H2Q8NH07 326 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 SMIM4Q8WVI0 70 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 DIRAS2Q96HU8 199 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 PRRT1Q99946 306 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 MIXL1Q9H2W2 232 aa10.66□□□□□ -0.7
HDLBP-247ENST00000498595 NOL3O60936 208 aaKnown RBP10.65□□□□□ -0.7
HDLBP-247ENST00000498595 IFNA4P05014 189 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 SLC25A4P12235 298 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 TMEM268Q5VZI3 342 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 ETFRF1Q6IPR1 90 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 FAAP20Q6NZ36 180 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 OR1S2Q8NGQ3 325 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 C11orf45Q8TAV5 145 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 RNASEH2CQ8TDP1 164 aaKnown RBP10.65□□□□□ -0.7
HDLBP-247ENST00000498595 Q8WTZ3 238 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 PHLDA1Q8WV24 401 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-247ENST00000498595 SCGB3A2Q96PL1 93 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 CACNG5Q9UF02 275 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 KCNIP3Q9Y2W7 256 aa10.65□□□□□ -0.7
HDLBP-247ENST00000498595 A0A0G2JRQ6 117 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 HELTA6NFD8 242 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 CTDSP2O14595 271 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 CRYBB3P26998 211 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 P2RY1P47900 373 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 BSXQ3C1V8 233 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 CLVS1Q8IUQ0 354 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-247ENST00000498595 CENPSQ8N2Z9 138 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 GLYATL2Q8WU03 294 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 RAB2BQ8WUD1 216 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 RTBDNQ9BSG5 229 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-247ENST00000498595 FNDC4Q9H6D8 234 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-247ENST00000498595 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
HDLBP-247ENST00000498595 CRYM-AS1A6NIL9 109 aa10.63□□□□□ -0.71
HDLBP-247ENST00000498595 CTDSPLO15194 276 aa10.63□□□□□ -0.71
HDLBP-247ENST00000498595 OR10J1P30954 320 aa10.63□□□□□ -0.71
HDLBP-247ENST00000498595 AP2S1P53680 142 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-247ENST00000498595 SPCS2Q15005 226 aa10.63□□□□□ -0.71
HDLBP-247ENST00000498595 RBMS2Q15434 407 aaKnown RBP10.63□□□□□ -0.71
HDLBP-247ENST00000498595 TIGITQ495A1 244 aa10.63□□□□□ -0.71
HDLBP-247ENST00000498595 AARDQ4LEZ3 155 aa10.63□□□□□ -0.71
HDLBP-247ENST00000498595 C2orf83Q53S99 150 aa10.63□□□□□ -0.71
HDLBP-247ENST00000498595 TMEM41BQ5BJD5 291 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms