RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 BTNL8Q6UX41 500 aa13.84□□□□□ -0.19
PRKCB-209ENST00000498058 ZNF502Q8TBZ5 544 aa13.84□□□□□ -0.19
PRKCB-209ENST00000498058 COMMD5Q9GZQ3 224 aa13.84□□□□□ -0.19
PRKCB-209ENST00000498058 DBX1A6NMT0 343 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 P0C879 139 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 C8orf88P0DMB2 117 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 HIST1H1BP16401 226 aaKnown RBP13.83□□□□□ -0.2
PRKCB-209ENST00000498058 SMCO1Q147U7 214 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 FAM106AQ4KMX7 169 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 NMSQ5H8A3 153 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 GGNBP1Q5YKI7 109 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 OR10W1Q8NGF6 305 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 OVOL2Q9BRP0 275 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 PDCD10Q9BUL8 212 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 MED28Q9H204 178 aa13.83□□□□□ -0.2
PRKCB-209ENST00000498058 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.83□□□□□ -0.2
PRKCB-209ENST00000498058 A0A0B4J293 547 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 C15orf61A6NNL5 157 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 JTBO76095 146 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 DEFA4P12838 97 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 GPR183P32249 361 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 SLC16A13Q7RTY0 426 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 OR5B3Q8NH48 314 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 IL17DQ8TAD2 202 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 GPR146Q96CH1 333 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 CACNG5Q9UF02 275 aa13.82□□□□□ -0.2
PRKCB-209ENST00000498058 TRBV7-1A0A0A6YYK4 115 aa13.81□□□□□ -0.2
PRKCB-209ENST00000498058 ADAP1O75689 374 aa13.81□□□□□ -0.2
PRKCB-209ENST00000498058 EWSR1Q01844 656 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRKCB-209ENST00000498058 GSG1LQ6UXU4 331 aa13.81□□□□□ -0.2
PRKCB-209ENST00000498058 OR1S1Q8NH92 325 aa13.81□□□□□ -0.2
PRKCB-209ENST00000498058 TMEM14BQ9NUH8 114 aa13.81□□□□□ -0.2
PRKCB-209ENST00000498058 OR51B2Q9Y5P1 312 aa13.81□□□□□ -0.2
PRKCB-209ENST00000498058 C5orf51A6NDU8 294 aa13.8□□□□□ -0.2
PRKCB-209ENST00000498058 FAM25EA8MYX2 175 aa13.8□□□□□ -0.2
PRKCB-209ENST00000498058 MFAP2P55001 183 aa13.8□□□□□ -0.2
PRKCB-209ENST00000498058 IAH1Q2TAA2 248 aaPredicted RBP13.8□□□□□ -0.2
PRKCB-209ENST00000498058 Q6ZNX1 250 aa13.8□□□□□ -0.2
PRKCB-209ENST00000498058 OR1L8Q8NGR8 309 aa13.8□□□□□ -0.2
PRKCB-209ENST00000498058 CXorf58Q96LI9 332 aa13.8□□□□□ -0.2
PRKCB-209ENST00000498058 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
PRKCB-209ENST00000498058 ZNF436Q9C0F3 470 aaPredicted RBP13.8□□□□□ -0.2
PRKCB-209ENST00000498058 NSG2Q9Y328 171 aa13.8□□□□□ -0.2
PRKCB-209ENST00000498058 LOC102724200A0A096LPH7 203 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-209ENST00000498058 A0A0G2JRQ6 117 aa13.79□□□□□ -0.2
PRKCB-209ENST00000498058 GOSR2O14653 212 aa13.79□□□□□ -0.2
PRKCB-209ENST00000498058 WT1-ASQ06250 92 aa13.79□□□□□ -0.2
PRKCB-209ENST00000498058 IZUMO4Q1ZYL8 232 aa13.79□□□□□ -0.2
PRKCB-209ENST00000498058 ZNF414Q96IQ9 312 aa13.79□□□□□ -0.2
PRKCB-209ENST00000498058 QTRT1Q9BXR0 403 aaKnown RBP13.79□□□□□ -0.2
PRKCB-209ENST00000498058 MGAT4CQ9UBM8 478 aa13.79□□□□□ -0.2
PRKCB-209ENST00000498058 FAM90A26D6RGX4 464 aa13.78□□□□□ -0.2
PRKCB-209ENST00000498058 IFNA17P01571 189 aa13.78□□□□□ -0.2
PRKCB-209ENST00000498058 TRAPPC2P0DI81 140 aa13.78□□□□□ -0.2
PRKCB-209ENST00000498058 TRAPPC2BP0DI82 140 aa13.78□□□□□ -0.2
PRKCB-209ENST00000498058 HSPE1P61604 102 aaKnown RBP13.78□□□□□ -0.2
PRKCB-209ENST00000498058 CYCSP99999 105 aaKnown RBP13.78□□□□□ -0.2
PRKCB-209ENST00000498058 AARDQ4LEZ3 155 aa13.78□□□□□ -0.2
PRKCB-209ENST00000498058 HSD17B13Q7Z5P4 300 aaPredicted RBP13.78□□□□□ -0.2
PRKCB-209ENST00000498058 OR52E5Q8NH55 327 aa13.78□□□□□ -0.2
PRKCB-209ENST00000498058 SRSF8Q9BRL6 282 aaKnown RBP13.78□□□□□ -0.2
PRKCB-209ENST00000498058 ENY2Q9NPA8 101 aa13.78□□□□□ -0.2
PRKCB-209ENST00000498058 MRPL27Q9P0M9 148 aaKnown RBP13.78□□□□□ -0.2
PRKCB-209ENST00000498058 IGHV3-21A0A0B4J1V1 117 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 TRAV25A0A0B4J276 109 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 TEX50A0A1B0GTY4 177 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 F8W735 103 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-209ENST00000498058 CCSO14618 274 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 ST8SIA3O43173 380 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 TGOLN2O43493 480 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 MED6O75586 246 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 SPCS3P61009 180 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 RRAS2P62070 204 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-209ENST00000498058 Q6ZRM9 215 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 TMEM190Q8WZ59 177 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 C2orf50Q96LR7 162 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 HINT2Q9BX68 163 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 GSKIPQ9P0R6 139 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 UBQLN2Q9UHD9 624 aa13.77□□□□□ -0.21
PRKCB-209ENST00000498058 OR2T8A6NH00 312 aa13.76□□□□□ -0.21
PRKCB-209ENST00000498058 OR13C7P0DN81 318 aa13.76□□□□□ -0.21
PRKCB-209ENST00000498058 ELLP55199 621 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-209ENST00000498058 ZBTB8BQ8NAP8 495 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-209ENST00000498058 OR1L6Q8NGR2 347 aa13.76□□□□□ -0.21
PRKCB-209ENST00000498058 ASB13Q8WXK3 278 aa13.76□□□□□ -0.21
PRKCB-209ENST00000498058 MARC2Q969Z3 335 aa13.76□□□□□ -0.21
PRKCB-209ENST00000498058 OR10C1Q96KK4 312 aa13.76□□□□□ -0.21
PRKCB-209ENST00000498058 CHRDL1Q9BU40 450 aa13.76□□□□□ -0.21
PRKCB-209ENST00000498058 IGHV3OR16-8A0A075B7F1 116 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 WRBO00258 174 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 PITX3O75364 302 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 PRCDQ00LT1 54 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 SLC25A24Q6NUK1 477 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 RBPMS2Q6ZRY4 209 aaKnown RBP13.75□□□□□ -0.21
PRKCB-209ENST00000498058 OR2C3Q8N628 320 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 VN1R17PQ8TDU5 208 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 NDUFA4L2Q9NRX3 87 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 HSPB7Q9UBY9 170 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 UFC1Q9Y3C8 167 aa13.75□□□□□ -0.21
PRKCB-209ENST00000498058 A0A0J9YWU9 116 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms