RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 RPL11P62913 178 aaKnown RBP10.79□□□□□ -0.68
ATG4B-223ENST00000493618 TNFRSF9Q07011 255 aa10.79□□□□□ -0.68
ATG4B-223ENST00000493618 ZNF600Q6ZNG1 722 aa10.79□□□□□ -0.68
ATG4B-223ENST00000493618 CLVS1Q8IUQ0 354 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-223ENST00000493618 C15orf40Q8WUR7 153 aa10.79□□□□□ -0.68
ATG4B-223ENST00000493618 RTBDNQ9BSG5 229 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-223ENST00000493618 C6orf62Q9GZU0 229 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-223ENST00000493618 FNDC4Q9H6D8 234 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-223ENST00000493618 C14orf166Q9Y224 244 aaKnown RBP10.79□□□□□ -0.68
ATG4B-223ENST00000493618 TEX13DA0A0J9YY54 714 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-223ENST00000493618 INS-IGF2F8WCM5 200 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 DNASE2O00115 360 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-223ENST00000493618 NXPH3O95157 252 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 IL18Q14116 193 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 MEF2DQ14814 521 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 PVRIGQ6DKI7 326 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 SELENOHQ8IZQ5 122 aaKnown RBP10.78□□□□□ -0.68
ATG4B-223ENST00000493618 FAM24BQ8N5W8 94 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 OR4C16Q8NGL9 310 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 TMEM222Q9H0R3 208 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 CSTL1Q9H114 145 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 MS4A6AQ9H2W1 248 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 VSIRQ9H7M9 311 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 NAA60Q9H7X0 242 aa10.78□□□□□ -0.68
ATG4B-223ENST00000493618 DISC1C4P0D8 188 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 CORTO00230 105 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 LY6G6CO95867 125 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 CMC4P56277 68 aaPredicted RBP10.77□□□□□ -0.69
ATG4B-223ENST00000493618 PAFAH1B2P68402 229 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 TIGITQ495A1 244 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 LEMD1Q68G75 181 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 GLYATL2Q8WU03 294 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 SMIM4Q8WVI0 70 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 LINC00476Q8WZB0 136 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 GPR146Q96CH1 333 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 DIRAS2Q96HU8 199 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 PRR13Q9NZ81 148 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 AGRNO00468 2067 aa10.77□□□□□ -0.69
ATG4B-223ENST00000493618 NUPR2A6NF83 97 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 MPTX1A8MV57 137 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 CLN5O75503 358 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 CDS2O95674 445 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 AKAIN1P0CW23 69 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 DEFB131AP59861 70 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 SPCS3P61009 180 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 MRPS10P82664 201 aaKnown RBP10.76□□□□□ -0.69
ATG4B-223ENST00000493618 SSBP1Q04837 148 aaKnown RBP10.76□□□□□ -0.69
ATG4B-223ENST00000493618 TMEM268Q5VZI3 342 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 TMEM230Q96A57 120 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 HEYLQ9NQ87 328 aaPredicted RBP10.76□□□□□ -0.69
ATG4B-223ENST00000493618 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.76□□□□□ -0.69
ATG4B-223ENST00000493618 CACNG5Q9UF02 275 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 RABAC1Q9UI14 185 aa10.76□□□□□ -0.69
ATG4B-223ENST00000493618 CRYM-AS1A6NIL9 109 aa10.75□□□□□ -0.69
ATG4B-223ENST00000493618 B3GALNT1O75752 331 aa10.75□□□□□ -0.69
ATG4B-223ENST00000493618 NPPCP23582 126 aa10.75□□□□□ -0.69
ATG4B-223ENST00000493618 BSXQ3C1V8 233 aa10.75□□□□□ -0.69
ATG4B-223ENST00000493618 CEMP1Q6PRD7 247 aaPredicted RBP10.75□□□□□ -0.69
ATG4B-223ENST00000493618 STXBP6Q8NFX7 210 aa10.75□□□□□ -0.69
ATG4B-223ENST00000493618 OR51S1Q8NGJ8 323 aa10.75□□□□□ -0.69
ATG4B-223ENST00000493618 OR4X1Q8NH49 305 aa10.75□□□□□ -0.69
ATG4B-223ENST00000493618 RBPMSQ93062 196 aaKnown RBP10.75□□□□□ -0.69
ATG4B-223ENST00000493618 GPR132Q9UNW8 380 aa10.75□□□□□ -0.69
ATG4B-223ENST00000493618 CEBPZOSA8MTT3 80 aa10.74□□□□□ -0.69
ATG4B-223ENST00000493618 CA1P00915 261 aaPredicted RBP10.74□□□□□ -0.69
ATG4B-223ENST00000493618 HTR2BP41595 481 aa10.74□□□□□ -0.69
ATG4B-223ENST00000493618 DHODHQ02127 395 aa10.74□□□□□ -0.69
ATG4B-223ENST00000493618 RBMS2Q15434 407 aaKnown RBP10.74□□□□□ -0.69
ATG4B-223ENST00000493618 FAM219AQ8IW50 185 aa10.74□□□□□ -0.69
ATG4B-223ENST00000493618 DYNC2LI1Q8TCX1 351 aa10.74□□□□□ -0.69
ATG4B-223ENST00000493618 METTL26Q96S19 204 aa10.74□□□□□ -0.69
ATG4B-223ENST00000493618 RARRES2Q99969 163 aa10.74□□□□□ -0.69
ATG4B-223ENST00000493618 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
ATG4B-223ENST00000493618 CCDC59Q9P031 241 aaKnown RBP10.74□□□□□ -0.69
ATG4B-223ENST00000493618 CTDSPLO15194 276 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 DEFB4AO15263 64 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 IGKV1-17P01599 117 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 CD5P06127 495 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 RPL5P46777 297 aaKnown RBP10.73□□□□□ -0.69
ATG4B-223ENST00000493618 P2RY1P47900 373 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 RND2P52198 227 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 SURF2Q15527 256 aaPredicted RBP10.73□□□□□ -0.69
ATG4B-223ENST00000493618 AARDQ4LEZ3 155 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 TMEM217Q8N7C4 229 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 OR11H2Q8NH07 326 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 OR52E5Q8NH55 327 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 GATAD1Q8WUU5 269 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 TMEM170AQ8WVE7 144 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 PRRT1Q99946 306 aa10.73□□□□□ -0.69
ATG4B-223ENST00000493618 RPS10-NUDT3A0A1W2PQS6 291 aa10.72□□□□□ -0.69
ATG4B-223ENST00000493618 A0A1W2PS18 150 aa10.72□□□□□ -0.69
ATG4B-223ENST00000493618 ANKRD20A5PA0PJZ0 165 aa10.72□□□□□ -0.69
ATG4B-223ENST00000493618 CRYBB3P26998 211 aa10.72□□□□□ -0.69
ATG4B-223ENST00000493618 NANOS2P60321 138 aaKnown RBP10.72□□□□□ -0.69
ATG4B-223ENST00000493618 PRSS54Q6PEW0 395 aa10.72□□□□□ -0.69
ATG4B-223ENST00000493618 STHQ8IWL8 128 aa10.72□□□□□ -0.69
ATG4B-223ENST00000493618 SLC24A4Q8NFF2 622 aa10.72□□□□□ -0.69
ATG4B-223ENST00000493618 RAB2BQ8WUD1 216 aa10.72□□□□□ -0.69
ATG4B-223ENST00000493618 PHLDA1Q8WV24 401 aaPredicted RBP10.72□□□□□ -0.69
ATG4B-223ENST00000493618 MCUBQ9NWR8 336 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms