RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 C15orf32Q32M92 178 aa6.05□□□□□ -1.44
SSR1-210ENST00000489567 C11orf87Q6NUJ2 197 aa6.05□□□□□ -1.44
SSR1-210ENST00000489567 ZNF429Q86V71 674 aa6.05□□□□□ -1.44
SSR1-210ENST00000489567 FAM223AQ8IWN6 122 aa6.05□□□□□ -1.44
SSR1-210ENST00000489567 NECAP1Q8NC96 275 aa6.05□□□□□ -1.44
SSR1-210ENST00000489567 DLX4Q92988 240 aaPredicted RBP6.05□□□□□ -1.44
SSR1-210ENST00000489567 LSM10Q969L4 123 aaKnown RBP6.05□□□□□ -1.44
SSR1-210ENST00000489567 RRNAD1Q96FB5 475 aaKnown RBP6.05□□□□□ -1.44
SSR1-210ENST00000489567 USMG5Q96IX5 58 aa6.05□□□□□ -1.44
SSR1-210ENST00000489567 CACNG5Q9UF02 275 aa6.05□□□□□ -1.44
SSR1-210ENST00000489567 FBXL7Q9UJT9 491 aa6.05□□□□□ -1.44
SSR1-210ENST00000489567 A0A0B4J2A0 478 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 A0A0G2JLM5 398 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 LINC01619G3V211 115 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 MED6O75586 246 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 UPK1BO75841 260 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 SCO1O75880 301 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 ATG12O94817 140 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 NXPH3O95157 252 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 SFT2D2O95562 160 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 PTTG1O95997 202 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 HSPB1P04792 205 aaKnown RBP6.04□□□□□ -1.44
SSR1-210ENST00000489567 DEFA4P12838 97 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 ZP3P21754 424 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 ATP5G2Q06055 141 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 ASAH1Q13510 395 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 EXOSC2Q13868 293 aaKnown RBP6.04□□□□□ -1.44
SSR1-210ENST00000489567 NMSQ5H8A3 153 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 LGI3Q8N145 548 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 DCUN1D4Q92564 292 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 IL22RA2Q969J5 263 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 PFDN5Q99471 154 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 SHPKQ9UHJ6 478 aa6.04□□□□□ -1.44
SSR1-210ENST00000489567 F11RQ9Y624 299 aaKnown RBP6.04□□□□□ -1.44
SSR1-210ENST00000489567 C9orf170A2RU37 121 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 IFNA17P01571 189 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 TCRBP04435 133 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 OR8U8P0C7N1 319 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 ANXA3P12429 323 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 HOXD3P31249 432 aaPredicted RBP6.03□□□□□ -1.44
SSR1-210ENST00000489567 ARL3P36405 182 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 DHRS2Q13268 280 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 BEAN1Q3B7T3 259 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 HSD17B13Q7Z5P4 300 aaPredicted RBP6.03□□□□□ -1.44
SSR1-210ENST00000489567 NOXA1Q86UR1 476 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 FAM219AQ8IW50 185 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 OR52B4Q8NGK2 314 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 DPF1Q92782 380 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 RNF125Q96EQ8 232 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 C20orf85Q9H1P6 137 aa6.03□□□□□ -1.44
SSR1-210ENST00000489567 PEF1Q9UBV8 284 aaKnown RBP6.03□□□□□ -1.44
SSR1-210ENST00000489567 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.02□□□□□ -1.44
SSR1-210ENST00000489567 IGHV3-21A0A0B4J1V1 117 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 A0A1W2PPQ1 181 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 PPP5D1E7EU14 171 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 BMPR1BO00238 502 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 HLA-AP01891 365 aaKnown RBP6.02□□□□□ -1.44
SSR1-210ENST00000489567 PRB2P02812 416 aaPredicted RBP6.02□□□□□ -1.44
SSR1-210ENST00000489567 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 GAGE1Q13065 139 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 LRTM2Q8N967 370 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 PLEKHA3Q9HB20 300 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 RANGRFQ9HD47 186 aaPredicted RBP6.02□□□□□ -1.44
SSR1-210ENST00000489567 NIT2Q9NQR4 276 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.02□□□□□ -1.44
SSR1-210ENST00000489567 RPH3ALQ9UNE2 315 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 ALG5Q9Y673 324 aa6.02□□□□□ -1.44
SSR1-210ENST00000489567 NOTCH3Q9UM47 2321 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 MPTX1A8MV57 137 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 KRBOX1C9JBD0 128 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 F8W735 103 aaPredicted RBP6.02□□□□□ -1.45
SSR1-210ENST00000489567 K7EIM0 57 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 ADAP1O75689 374 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 SULT1A3P0DMM9 295 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 SULT1A4P0DMN0 295 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 HIST1H1BP16401 226 aaKnown RBP6.02□□□□□ -1.45
SSR1-210ENST00000489567 CDKN1BP46527 198 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 UBE2MP61081 183 aaKnown RBP6.02□□□□□ -1.45
SSR1-210ENST00000489567 SRPXP78539 464 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 PDLIM3Q53GG5 364 aaPredicted RBP6.02□□□□□ -1.45
SSR1-210ENST00000489567 KPRPQ5T749 579 aaPredicted RBP6.02□□□□□ -1.45
SSR1-210ENST00000489567 CLEC19AQ6UXS0 136 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 LYG2Q86SG7 212 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 ZNF114Q8NC26 417 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 OR1P1Q8NH06 330 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 OR52E5Q8NH55 327 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 ZMAT4Q9H898 229 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 MLXQ9UH92 298 aa6.02□□□□□ -1.45
SSR1-210ENST00000489567 FAM240BA0A1B0GVZ2 78 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 INS-IGF2F8WCM5 200 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 OVOL1O14753 267 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 PITX3O75364 302 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 IGHV3-48P01763 117 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 HOXB5P09067 269 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 RNASE2P10153 161 aaKnown RBP6.01□□□□□ -1.45
SSR1-210ENST00000489567 SYNJ2BPP57105 145 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 KRTAP10-11P60412 298 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 BTN1A1Q13410 526 aa6.01□□□□□ -1.45
SSR1-210ENST00000489567 KLF5Q13887 457 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 245 ms