RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 ST8SIA2Q92186 375 aa16.67■□□□□ 0.26
PTPN4-211ENST00000488279 TMEM222Q9H0R3 208 aa16.67■□□□□ 0.26
PTPN4-211ENST00000488279 A0A0G2JRQ6 117 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 TEX13DA0A0J9YY54 714 aaPredicted RBP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 NUPR2A6NF83 97 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 MPTX1A8MV57 137 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 DISC1C4P0D8 188 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 DNASE2O00115 360 aaPredicted RBP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 APOHP02749 345 aaPredicted RBP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 OR5AC1P0C628 307 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 ATF4P18848 351 aaPredicted RBP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 OPRK1P41145 380 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 RPL5P46777 297 aaKnown RBP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 ALDH3B2P48448 385 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 SPCS3P61009 180 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 RPL11P62913 178 aaKnown RBP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 EWSR1Q01844 656 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 SPCS2Q15005 226 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 Q6ZRM9 215 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 RTBDNQ9BSG5 229 aaPredicted RBP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 ZFAND3Q9H8U3 227 aa16.66■□□□□ 0.26
PTPN4-211ENST00000488279 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.66■□□□□ 0.26
PTPN4-211ENST00000488279 IGHV3-66A0A0C4DH42 116 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 A0A1B0GU03 582 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 CLN5O75503 358 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 SCGB2A1O75556 95 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 DFFBO76075 338 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 NPPCP23582 126 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 FAAP20Q6NZ36 180 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 LILRB2Q8N423 598 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 OR4X1Q8NH49 305 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 OR52E5Q8NH55 327 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 GLYATL2Q8WU03 294 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 SMIM4Q8WVI0 70 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 MS4A6AQ9H2W1 248 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 TMEM231Q9H6L2 316 aa16.65■□□□□ 0.26
PTPN4-211ENST00000488279 DHODHQ02127 395 aa16.64■□□□□ 0.25
PTPN4-211ENST00000488279 SURF2Q15527 256 aaPredicted RBP16.64■□□□□ 0.25
PTPN4-211ENST00000488279 MLANAQ16655 118 aa16.64■□□□□ 0.25
PTPN4-211ENST00000488279 RBPMSQ93062 196 aaKnown RBP16.64■□□□□ 0.25
PTPN4-211ENST00000488279 FNDC4Q9H6D8 234 aaPredicted RBP16.64■□□□□ 0.25
PTPN4-211ENST00000488279 NAA60Q9H7X0 242 aa16.64■□□□□ 0.25
PTPN4-211ENST00000488279 RABL2AQ9UBK7 228 aaPredicted RBP16.64■□□□□ 0.25
PTPN4-211ENST00000488279 RABL2BQ9UNT1 228 aa16.64■□□□□ 0.25
PTPN4-211ENST00000488279 A0A1W2PS18 150 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 AKAIN1P0CW23 69 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 HTR2BP41595 481 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 IL18Q14116 193 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 BSXQ3C1V8 233 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 AARDQ4LEZ3 155 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 CEMP1Q6PRD7 247 aaPredicted RBP16.63■□□□□ 0.25
PTPN4-211ENST00000488279 GATAD1Q8WUU5 269 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 TMEM230Q96A57 120 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 DIRAS2Q96HU8 199 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 METTL26Q96S19 204 aa16.63■□□□□ 0.25
PTPN4-211ENST00000488279 MRPL36Q9P0J6 103 aaKnown RBP16.63■□□□□ 0.25
PTPN4-211ENST00000488279 TRAV2A0A0B4J234 112 aa16.62■□□□□ 0.25
PTPN4-211ENST00000488279 CTDSPLO15194 276 aa16.62■□□□□ 0.25
PTPN4-211ENST00000488279 CLVS1Q8IUQ0 354 aaPredicted RBP16.62■□□□□ 0.25
PTPN4-211ENST00000488279 SELENOHQ8IZQ5 122 aaKnown RBP16.62■□□□□ 0.25
PTPN4-211ENST00000488279 LHFPL5Q8TAF8 219 aa16.62■□□□□ 0.25
PTPN4-211ENST00000488279 PRRT1Q99946 306 aa16.62■□□□□ 0.25
PTPN4-211ENST00000488279 HEYLQ9NQ87 328 aaPredicted RBP16.62■□□□□ 0.25
PTPN4-211ENST00000488279 GPR132Q9UNW8 380 aa16.62■□□□□ 0.25
PTPN4-211ENST00000488279 ALMS1Q8TCU4 4167 aa16.62■□□□□ 0.25
PTPN4-211ENST00000488279 TRAV30A0A087WSZ9 112 aa16.61■□□□□ 0.25
PTPN4-211ENST00000488279 RPS10-NUDT3A0A1W2PQS6 291 aa16.61■□□□□ 0.25
PTPN4-211ENST00000488279 OR4C16Q8NGL9 310 aa16.61■□□□□ 0.25
PTPN4-211ENST00000488279 RAB2BQ8WUD1 216 aa16.61■□□□□ 0.25
PTPN4-211ENST00000488279 LINC00476Q8WZB0 136 aa16.61■□□□□ 0.25
PTPN4-211ENST00000488279 RARRES2Q99969 163 aa16.61■□□□□ 0.25
PTPN4-211ENST00000488279 KLK5Q9Y337 293 aaPredicted RBP16.61■□□□□ 0.25
PTPN4-211ENST00000488279 CRYM-AS1A6NIL9 109 aa16.6■□□□□ 0.25
PTPN4-211ENST00000488279 DEFB131AP59861 70 aa16.6■□□□□ 0.25
PTPN4-211ENST00000488279 TMEM268Q5VZI3 342 aa16.6■□□□□ 0.25
PTPN4-211ENST00000488279 GPR146Q96CH1 333 aa16.6■□□□□ 0.25
PTPN4-211ENST00000488279 NARS2Q96I59 477 aaKnown RBP16.6■□□□□ 0.25
PTPN4-211ENST00000488279 CACNG5Q9UF02 275 aa16.6■□□□□ 0.25
PTPN4-211ENST00000488279 RABAC1Q9UI14 185 aa16.6■□□□□ 0.25
PTPN4-211ENST00000488279 LY6G6CO95867 125 aa16.59■□□□□ 0.25
PTPN4-211ENST00000488279 CRYBB3P26998 211 aa16.59■□□□□ 0.25
PTPN4-211ENST00000488279 LEMD1Q68G75 181 aa16.59■□□□□ 0.25
PTPN4-211ENST00000488279 OR51S1Q8NGJ8 323 aa16.59■□□□□ 0.25
PTPN4-211ENST00000488279 CCDC59Q9P031 241 aaKnown RBP16.59■□□□□ 0.25
PTPN4-211ENST00000488279 CACFD1Q9UGQ2 172 aa16.59■□□□□ 0.25
PTPN4-211ENST00000488279 KCNIP3Q9Y2W7 256 aa16.59■□□□□ 0.25
PTPN4-211ENST00000488279 TMEM56-RWDD3S4R434 201 aa16.59■□□□□ 0.25
PTPN4-211ENST00000488279 CEBPZOSA8MTT3 80 aa16.58■□□□□ 0.24
PTPN4-211ENST00000488279 IGKV1-17P01599 117 aa16.58■□□□□ 0.24
PTPN4-211ENST00000488279 TMBIM6P55061 237 aa16.58■□□□□ 0.24
PTPN4-211ENST00000488279 TIGITQ495A1 244 aa16.58■□□□□ 0.24
PTPN4-211ENST00000488279 C2orf83Q53S99 150 aa16.58■□□□□ 0.24
PTPN4-211ENST00000488279 OR11H2Q8NH07 326 aa16.58■□□□□ 0.24
PTPN4-211ENST00000488279 DYNC2LI1Q8TCX1 351 aa16.58■□□□□ 0.24
PTPN4-211ENST00000488279 RNASEH2CQ8TDP1 164 aaKnown RBP16.58■□□□□ 0.24
PTPN4-211ENST00000488279 BCL7BQ9BQE9 202 aa16.58■□□□□ 0.24
PTPN4-211ENST00000488279 CA1P00915 261 aaPredicted RBP16.57■□□□□ 0.24
PTPN4-211ENST00000488279 SLC25A4P12235 298 aa16.57■□□□□ 0.24
PTPN4-211ENST00000488279 P2RY1P47900 373 aa16.57■□□□□ 0.24
PTPN4-211ENST00000488279 FAM24BQ8N5W8 94 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms