RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ADAP1O75689 374 aa11.18□□□□□ -0.62
LIMS3-205ENST00000487150 IFNA4P05014 189 aa11.18□□□□□ -0.62
LIMS3-205ENST00000487150 BMI1P35226 326 aa11.18□□□□□ -0.62
LIMS3-205ENST00000487150 IAH1Q2TAA2 248 aaPredicted RBP11.18□□□□□ -0.62
LIMS3-205ENST00000487150 C12orf45Q8N5I9 185 aaPredicted RBP11.18□□□□□ -0.62
LIMS3-205ENST00000487150 OR4X1Q8NH49 305 aa11.18□□□□□ -0.62
LIMS3-205ENST00000487150 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
LIMS3-205ENST00000487150 ZNF436Q9C0F3 470 aaPredicted RBP11.18□□□□□ -0.62
LIMS3-205ENST00000487150 TECRQ9NZ01 308 aaKnown RBP11.18□□□□□ -0.62
LIMS3-205ENST00000487150 ZNF256Q9Y2P7 627 aaPredicted RBP11.18□□□□□ -0.62
LIMS3-205ENST00000487150 IGHV3-21A0A0B4J1V1 117 aa11.17□□□□□ -0.62
LIMS3-205ENST00000487150 SNRPGP15A8MWD9 76 aa11.17□□□□□ -0.62
LIMS3-205ENST00000487150 PTTG1O95997 202 aa11.17□□□□□ -0.62
LIMS3-205ENST00000487150 IGLV1-51P01701 117 aa11.17□□□□□ -0.62
LIMS3-205ENST00000487150 IFITM3Q01628 133 aa11.17□□□□□ -0.62
LIMS3-205ENST00000487150 NRARPQ7Z6K4 114 aa11.17□□□□□ -0.62
LIMS3-205ENST00000487150 OR52B4Q8NGK2 314 aa11.17□□□□□ -0.62
LIMS3-205ENST00000487150 GINS3Q9BRX5 216 aa11.17□□□□□ -0.62
LIMS3-205ENST00000487150 AURKAIP1Q9NWT8 199 aaPredicted RBP11.17□□□□□ -0.62
LIMS3-205ENST00000487150 C2orf70A6NJV1 201 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 C15orf62A8K5M9 175 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 F8W735 103 aaPredicted RBP11.16□□□□□ -0.62
LIMS3-205ENST00000487150 INMT-MINDY4F8WBC2 141 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 CLN5O75503 358 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 SCAF4O95104 1147 aaKnown RBP11.16□□□□□ -0.62
LIMS3-205ENST00000487150 ID3Q02535 119 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 UXS1Q8NBZ7 420 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 TMEM116Q8NCL8 245 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 OR4D5Q8NGN0 318 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 RAB40CQ96S21 281 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 SEC22CQ9BRL7 303 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 MARVELD1Q9BSK0 173 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 ZC4H2Q9NQZ6 224 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 NOTCH1P46531 2555 aa11.16□□□□□ -0.62
LIMS3-205ENST00000487150 C5orf51A6NDU8 294 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 FABP1P07148 127 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 CSN3P07498 182 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 CTSGP08311 255 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 IAPPP10997 89 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 FOLR2P14207 255 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 TAS2R30P59541 319 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 IL34Q6ZMJ4 242 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 SLC16A13Q7RTY0 426 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 ZBTB8BQ8NAP8 495 aaPredicted RBP11.15□□□□□ -0.62
LIMS3-205ENST00000487150 OR1S2Q8NGQ3 325 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
LIMS3-205ENST00000487150 MRPL27Q9P0M9 148 aaKnown RBP11.15□□□□□ -0.62
LIMS3-205ENST00000487150 STRAPQ9Y3F4 350 aaKnown RBP11.15□□□□□ -0.62
LIMS3-205ENST00000487150 CMYA5Q8N3K9 4069 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 TMEM213A2RRL7 107 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 FAM25EA8MYX2 175 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 K7EMT4 169 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 YIF1AO95070 293 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 ADMP35318 185 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
LIMS3-205ENST00000487150 CD69Q07108 199 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 MRAPQ8TCY5 172 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 CHRDL1Q9BU40 450 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 C20orf24Q9BUV8 137 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 FNDC4Q9H6D8 234 aaPredicted RBP11.14□□□□□ -0.63
LIMS3-205ENST00000487150 GSKIPQ9P0R6 139 aa11.14□□□□□ -0.63
LIMS3-205ENST00000487150 PAIP2BQ9ULR5 123 aaKnown RBP11.14□□□□□ -0.63
LIMS3-205ENST00000487150 MPTX1A8MV57 137 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 SSSCA1O60232 199 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 SCGB1D2O95969 90 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 CD5P06127 495 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 PVALBP20472 110 aaPredicted RBP11.13□□□□□ -0.63
LIMS3-205ENST00000487150 CBLN1P23435 193 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 RND2P52198 227 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 KRTAP10-11P60412 298 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 NARS2Q96I59 477 aaKnown RBP11.13□□□□□ -0.63
LIMS3-205ENST00000487150 C2orf50Q96LR7 162 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 MAGT1Q9H0U3 335 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 TMEM231Q9H6L2 316 aa11.13□□□□□ -0.63
LIMS3-205ENST00000487150 TRAV25A0A0B4J276 109 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 TSC22D2O75157 780 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 TMEM50AO95807 157 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 GP9P14770 177 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 SPNP16150 400 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 OR10J1P30954 320 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 POLR2GP62487 172 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIMS3-205ENST00000487150 CYCSP99999 105 aaKnown RBP11.12□□□□□ -0.63
LIMS3-205ENST00000487150 SPANXN5Q5MJ07 72 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 TMEM170AQ8WVE7 144 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 ACY3Q96HD9 319 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 SMIM8Q96KF7 97 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 OR10C1Q96KK4 312 aa11.12□□□□□ -0.63
LIMS3-205ENST00000487150 L7N2F9 121 aa11.11□□□□□ -0.63
LIMS3-205ENST00000487150 CCSO14618 274 aa11.11□□□□□ -0.63
LIMS3-205ENST00000487150 C8orf88P0DMB2 117 aa11.11□□□□□ -0.63
LIMS3-205ENST00000487150 YPEL3P61236 119 aaPredicted RBP11.11□□□□□ -0.63
LIMS3-205ENST00000487150 VAMP2P63027 116 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms