RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
CLK1-211ENST00000481641 GINS3Q9BRX5 216 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 RTBDNQ9BSG5 229 aaPredicted RBP13.66□□□□□ -0.22
CLK1-211ENST00000481641 VSIRQ9H7M9 311 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 SUB1P53999 127 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLK1-211ENST00000481641 FAM24BQ8N5W8 94 aa13.65□□□□□ -0.22
CLK1-211ENST00000481641 MRPS26Q9BYN8 205 aaKnown RBP13.65□□□□□ -0.22
CLK1-211ENST00000481641 C6orf62Q9GZU0 229 aaPredicted RBP13.65□□□□□ -0.22
CLK1-211ENST00000481641 CSTL1Q9H114 145 aa13.65□□□□□ -0.22
CLK1-211ENST00000481641 MS4A6AQ9H2W1 248 aa13.65□□□□□ -0.22
CLK1-211ENST00000481641 ENY2Q9NPA8 101 aa13.65□□□□□ -0.22
CLK1-211ENST00000481641 OPRK1P41145 380 aa13.64□□□□□ -0.23
CLK1-211ENST00000481641 GLYATL2Q8WU03 294 aa13.64□□□□□ -0.23
CLK1-211ENST00000481641 LINC00476Q8WZB0 136 aa13.64□□□□□ -0.23
CLK1-211ENST00000481641 TMEM222Q9H0R3 208 aa13.64□□□□□ -0.23
CLK1-211ENST00000481641 C14orf166Q9Y224 244 aaKnown RBP13.64□□□□□ -0.23
CLK1-211ENST00000481641 TEX13DA0A0J9YY54 714 aaPredicted RBP13.63□□□□□ -0.23
CLK1-211ENST00000481641 MPTX1A8MV57 137 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 DNASE2O00115 360 aaPredicted RBP13.63□□□□□ -0.23
CLK1-211ENST00000481641 CLN5O75503 358 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 CDS2O95674 445 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 LY6G6CO95867 125 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 CMC4P56277 68 aaPredicted RBP13.63□□□□□ -0.23
CLK1-211ENST00000481641 RPL11P62913 178 aaKnown RBP13.63□□□□□ -0.23
CLK1-211ENST00000481641 PAFAH1B2P68402 229 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 LEMD1Q68G75 181 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 CEMP1Q6PRD7 247 aaPredicted RBP13.63□□□□□ -0.23
CLK1-211ENST00000481641 CLVS1Q8IUQ0 354 aaPredicted RBP13.63□□□□□ -0.23
CLK1-211ENST00000481641 SELENOHQ8IZQ5 122 aaKnown RBP13.63□□□□□ -0.23
CLK1-211ENST00000481641 OR4C16Q8NGL9 310 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 GPR146Q96CH1 333 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 NAA60Q9H7X0 242 aa13.63□□□□□ -0.23
CLK1-211ENST00000481641 NUPR2A6NF83 97 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 DISC1C4P0D8 188 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 CORTO00230 105 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 DEFB131AP59861 70 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 SPCS3P61009 180 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 SSBP1Q04837 148 aaKnown RBP13.62□□□□□ -0.23
CLK1-211ENST00000481641 IL18Q14116 193 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 MEF2DQ14814 521 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 BSXQ3C1V8 233 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 TIGITQ495A1 244 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 OR4X1Q8NH49 305 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 SMIM4Q8WVI0 70 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 DIRAS2Q96HU8 199 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 GPR132Q9UNW8 380 aa13.62□□□□□ -0.23
CLK1-211ENST00000481641 AGRNO00468 2067 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 B3GALNT1O75752 331 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 NXPH3O95157 252 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 NPPCP23582 126 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 MRPS10P82664 201 aaKnown RBP13.61□□□□□ -0.23
CLK1-211ENST00000481641 RBPMSQ93062 196 aaKnown RBP13.61□□□□□ -0.23
CLK1-211ENST00000481641 TMEM230Q96A57 120 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 RARRES2Q99969 163 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.61□□□□□ -0.23
CLK1-211ENST00000481641 PRR13Q9NZ81 148 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 CACNG5Q9UF02 275 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
CLK1-211ENST00000481641 IGKV1-17P01599 117 aa13.6□□□□□ -0.23
CLK1-211ENST00000481641 AKAIN1P0CW23 69 aa13.6□□□□□ -0.23
CLK1-211ENST00000481641 RPL5P46777 297 aaKnown RBP13.6□□□□□ -0.23
CLK1-211ENST00000481641 AARDQ4LEZ3 155 aa13.6□□□□□ -0.23
CLK1-211ENST00000481641 TMEM268Q5VZI3 342 aa13.6□□□□□ -0.23
CLK1-211ENST00000481641 FAM219AQ8IW50 185 aa13.6□□□□□ -0.23
CLK1-211ENST00000481641 OR51S1Q8NGJ8 323 aa13.6□□□□□ -0.23
CLK1-211ENST00000481641 DYNC2LI1Q8TCX1 351 aa13.6□□□□□ -0.23
CLK1-211ENST00000481641 HEYLQ9NQ87 328 aaPredicted RBP13.6□□□□□ -0.23
CLK1-211ENST00000481641 CRYM-AS1A6NIL9 109 aa13.59□□□□□ -0.23
CLK1-211ENST00000481641 CA1P00915 261 aaPredicted RBP13.59□□□□□ -0.23
CLK1-211ENST00000481641 CD5P06127 495 aa13.59□□□□□ -0.23
CLK1-211ENST00000481641 DHODHQ02127 395 aa13.59□□□□□ -0.23
CLK1-211ENST00000481641 RBMS2Q15434 407 aaKnown RBP13.59□□□□□ -0.23
CLK1-211ENST00000481641 STXBP6Q8NFX7 210 aa13.59□□□□□ -0.23
CLK1-211ENST00000481641 OR11H2Q8NH07 326 aa13.59□□□□□ -0.23
CLK1-211ENST00000481641 OR52E5Q8NH55 327 aa13.59□□□□□ -0.23
CLK1-211ENST00000481641 GATAD1Q8WUU5 269 aa13.59□□□□□ -0.23
CLK1-211ENST00000481641 METTL26Q96S19 204 aa13.59□□□□□ -0.23
CLK1-211ENST00000481641 CEBPZOSA8MTT3 80 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 CTDSPLO15194 276 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 DEFB4AO15263 64 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 ATF4P18848 351 aaPredicted RBP13.58□□□□□ -0.24
CLK1-211ENST00000481641 CRYBB3P26998 211 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 HTR2BP41595 481 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 P2RY1P47900 373 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 SURF2Q15527 256 aaPredicted RBP13.58□□□□□ -0.24
CLK1-211ENST00000481641 TMEM217Q8N7C4 229 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 PHLDA1Q8WV24 401 aaPredicted RBP13.58□□□□□ -0.24
CLK1-211ENST00000481641 TMEM170AQ8WVE7 144 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 TMEM231Q9H6L2 316 aa13.58□□□□□ -0.24
CLK1-211ENST00000481641 TRAV2A0A0B4J234 112 aa13.57□□□□□ -0.24
CLK1-211ENST00000481641 A0A1W2PS18 150 aa13.57□□□□□ -0.24
CLK1-211ENST00000481641 K7EQG2 157 aa13.57□□□□□ -0.24
CLK1-211ENST00000481641 RND2P52198 227 aa13.57□□□□□ -0.24
CLK1-211ENST00000481641 NANOS2P60321 138 aaKnown RBP13.57□□□□□ -0.24
CLK1-211ENST00000481641 C2orf83Q53S99 150 aa13.57□□□□□ -0.24
CLK1-211ENST00000481641 PRSS54Q6PEW0 395 aa13.57□□□□□ -0.24
CLK1-211ENST00000481641 CCDC59Q9P031 241 aaKnown RBP13.57□□□□□ -0.24
CLK1-211ENST00000481641 KLK5Q9Y337 293 aaPredicted RBP13.57□□□□□ -0.24
CLK1-211ENST00000481641 RPS10-NUDT3A0A1W2PQS6 291 aa13.56□□□□□ -0.24
CLK1-211ENST00000481641 ANKRD20A5PA0PJZ0 165 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms