RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 IGHV3-21A0A0B4J1V1 117 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 LCE6AA0A183 80 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 CRYM-AS1A6NIL9 109 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 CHEK1O14757 476 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 CLN5O75503 358 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 OR5AC1P0C628 307 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 EDN2P20800 178 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 S100A5P33763 92 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 SPCS2Q15005 226 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 TMEM41BQ5BJD5 291 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 OR4D10Q8NGI6 311 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 OR4X1Q8NH49 305 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 WFDC10AQ9H1F0 79 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 MIXL1Q9H2W2 232 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 TMEM56-RWDD3S4R434 201 aa8.54□□□□□ -1.04
CCM2-213ENST00000480658 DUXBA0A1W2PPF3 345 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 ANKRD20A5PA0PJZ0 165 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 NUPR2A6NF83 97 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 FABP12A6NFH5 140 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 CTDSP2O14595 271 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 SPRY2O43597 315 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 NPPCP23582 126 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 AP2S1P53680 142 aaPredicted RBP8.53□□□□□ -1.04
CCM2-213ENST00000480658 BSXQ3C1V8 233 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
CCM2-213ENST00000480658 TMEM268Q5VZI3 342 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 SLC24A4Q8NFF2 622 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 OR4C16Q8NGL9 310 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 GLYATL2Q8WU03 294 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 GATAD1Q8WUU5 269 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 RNF2Q99496 336 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 HEYLQ9NQ87 328 aaPredicted RBP8.53□□□□□ -1.04
CCM2-213ENST00000480658 MCUBQ9NWR8 336 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 GPR132Q9UNW8 380 aa8.53□□□□□ -1.04
CCM2-213ENST00000480658 PUS1Q9Y606 427 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCM2-213ENST00000480658 A0A0B4J2A0 478 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 HELTA6NFD8 242 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 H3BMQ9 156 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 DNASE2O00115 360 aaPredicted RBP8.52□□□□□ -1.05
CCM2-213ENST00000480658 SULT1A3P0DMM9 295 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 SULT1A4P0DMN0 295 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 RNASE2P10153 161 aaKnown RBP8.52□□□□□ -1.05
CCM2-213ENST00000480658 CCR6P51684 374 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 TNFRSF9Q07011 255 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 ODF3L2Q3SX64 289 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 SP6Q3SY56 376 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 C2orf83Q53S99 150 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 ZFAND6Q6FIF0 208 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 TOMM20LQ6UXN7 152 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 OR51S1Q8NGJ8 323 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 OR1S2Q8NGQ3 325 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 MCFD2Q8NI22 146 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 RTBDNQ9BSG5 229 aaPredicted RBP8.52□□□□□ -1.05
CCM2-213ENST00000480658 VSIRQ9H7M9 311 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 CACNG5Q9UF02 275 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 SHPKQ9UHJ6 478 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 U3KQ87 197 aa8.52□□□□□ -1.05
CCM2-213ENST00000480658 HUWE1Q7Z6Z7 4374 aaKnown RBP8.52□□□□□ -1.05
CCM2-213ENST00000480658 CEBPZOSA8MTT3 80 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 MPTX1A8MV57 137 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 TMEM50AO95807 157 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 FABP1P07148 127 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 ETV6P41212 452 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 RPL11P62913 178 aaKnown RBP8.51□□□□□ -1.05
CCM2-213ENST00000480658 TCF24Q7RTU0 167 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 LGI3Q8N145 548 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 TOMM5Q8N4H5 51 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 TMEM230Q96A57 120 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 SLC25A21Q9BQT8 299 aaPredicted RBP8.51□□□□□ -1.05
CCM2-213ENST00000480658 OVOL2Q9BRP0 275 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 SLIRPQ9GZT3 109 aaKnown RBP8.51□□□□□ -1.05
CCM2-213ENST00000480658 RETNQ9HD89 108 aa8.51□□□□□ -1.05
CCM2-213ENST00000480658 ZNF701M0R085 212 aaPredicted RBP8.5□□□□□ -1.05
CCM2-213ENST00000480658 ZNF207O43670 478 aaKnown RBP8.5□□□□□ -1.05
CCM2-213ENST00000480658 AKR1C4P17516 323 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 NPY1RP25929 384 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 CRYBB3P26998 211 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 S100A7P31151 101 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 YPEL3P61236 119 aaPredicted RBP8.5□□□□□ -1.05
CCM2-213ENST00000480658 SMCO1Q147U7 214 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 SPINK9Q5DT21 86 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 NMSQ5H8A3 153 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 FAM90A2PQ658T7 463 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 FAAP20Q6NZ36 180 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 SELENOHQ8IZQ5 122 aaKnown RBP8.5□□□□□ -1.05
CCM2-213ENST00000480658 Q8WTZ3 238 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 RNF183Q96D59 192 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 CSTL1Q9H114 145 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 UBQLN2Q9UHD9 624 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
CCM2-213ENST00000480658 IGHV3OR16-8A0A075B7F1 116 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 A0A1B0GU03 582 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 TNFSF8P32971 234 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 RPP30P78346 268 aaKnown RBP8.49□□□□□ -1.05
CCM2-213ENST00000480658 IZUMO4Q1ZYL8 232 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 DEFB135Q30KP9 77 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 TMEM128Q5BJH2 165 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 SPANXN2Q5MJ10 180 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms