RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 USE1Q9NZ43 259 aa2.57□□□□□ -2
BRAF-203ENST00000479537 SCN8AQ9UQD0 1980 aa2.57□□□□□ -2
BRAF-203ENST00000479537 RP1P56715 2156 aa2.57□□□□□ -2
BRAF-203ENST00000479537 CHD3Q12873 2000 aaKnown RBP2.56□□□□□ -2
BRAF-203ENST00000479537 IGHV3-73A0A0B4J1V6 119 aa2.56□□□□□ -2
BRAF-203ENST00000479537 LY6HO94772 140 aa2.56□□□□□ -2
BRAF-203ENST00000479537 IL6P05231 212 aa2.56□□□□□ -2
BRAF-203ENST00000479537 UQCRHP07919 91 aa2.56□□□□□ -2
BRAF-203ENST00000479537 MAGEA2P43356 314 aa2.56□□□□□ -2
BRAF-203ENST00000479537 CDC34P49427 236 aaPredicted RBP2.56□□□□□ -2
BRAF-203ENST00000479537 TSPEAR-AS2P59090 65 aa2.56□□□□□ -2
BRAF-203ENST00000479537 TAS2R45P59539 299 aa2.56□□□□□ -2
BRAF-203ENST00000479537 FGF12P61328 243 aa2.56□□□□□ -2
BRAF-203ENST00000479537 PPP1R1AQ13522 171 aa2.56□□□□□ -2
BRAF-203ENST00000479537 C9orf64Q5T6V5 341 aa2.56□□□□□ -2
BRAF-203ENST00000479537 NAA40Q86UY6 237 aa2.56□□□□□ -2
BRAF-203ENST00000479537 BAP18Q8IXM2 172 aa2.56□□□□□ -2
BRAF-203ENST00000479537 Q8N402 240 aa2.56□□□□□ -2
BRAF-203ENST00000479537 GNB1LQ9BYB4 327 aa2.56□□□□□ -2
BRAF-203ENST00000479537 XPNPEP1Q9NQW7 623 aa2.56□□□□□ -2
BRAF-203ENST00000479537 TXNL4BQ9NX01 149 aaKnown RBP2.56□□□□□ -2
BRAF-203ENST00000479537 HHLA2Q9UM44 414 aa2.56□□□□□ -2
BRAF-203ENST00000479537 MYOFQ9NZM1 2061 aa2.56□□□□□ -2
BRAF-203ENST00000479537 DHRS12A0PJE2 317 aa2.55□□□□□ -2
BRAF-203ENST00000479537 C5orf49A4QMS7 147 aa2.55□□□□□ -2
BRAF-203ENST00000479537 KPNA3O00505 521 aaPredicted RBP2.55□□□□□ -2
BRAF-203ENST00000479537 PIRO00625 290 aa2.55□□□□□ -2
BRAF-203ENST00000479537 UBE2L6O14933 153 aa2.55□□□□□ -2
BRAF-203ENST00000479537 CXCL8P10145 99 aa2.55□□□□□ -2
BRAF-203ENST00000479537 CD36P16671 472 aa2.55□□□□□ -2
BRAF-203ENST00000479537 OR10J1P30954 320 aa2.55□□□□□ -2
BRAF-203ENST00000479537 DAPP51397 102 aa2.55□□□□□ -2
BRAF-203ENST00000479537 TMEM176BQ3YBM2 270 aaPredicted RBP2.55□□□□□ -2
BRAF-203ENST00000479537 SLC36A2Q495M3 483 aa2.55□□□□□ -2
BRAF-203ENST00000479537 TNFAIP8L2Q6P589 184 aaPredicted RBP2.55□□□□□ -2
BRAF-203ENST00000479537 CT55Q8WUE5 264 aa2.55□□□□□ -2
BRAF-203ENST00000479537 EMC3Q9P0I2 261 aa2.55□□□□□ -2
BRAF-203ENST00000479537 MINOS1-NBL1R4GNA1 71 aa2.55□□□□□ -2
BRAF-203ENST00000479537 UNC13CQ8NB66 2214 aa2.54□□□□□ -2
BRAF-203ENST00000479537 DSCAML1Q8TD84 2053 aa2.54□□□□□ -2
BRAF-203ENST00000479537 TNRC6AQ8NDV7 1962 aaKnown RBP2.54□□□□□ -2
BRAF-203ENST00000479537 PLXNA2O75051 1894 aa2.54□□□□□ -2
BRAF-203ENST00000479537 OBSL1O75147 1896 aa2.54□□□□□ -2
BRAF-203ENST00000479537 ZNF106Q9H2Y7 1883 aaKnown RBP2.54□□□□□ -2
BRAF-203ENST00000479537 H0Y980 276 aa2.54□□□□□ -2
BRAF-203ENST00000479537 LYPLA2O95372 231 aa2.54□□□□□ -2
BRAF-203ENST00000479537 TMEM33P57088 247 aa2.54□□□□□ -2
BRAF-203ENST00000479537 FABP5Q01469 135 aa2.54□□□□□ -2
BRAF-203ENST00000479537 MLLT11Q13015 90 aaPredicted RBP2.54□□□□□ -2
BRAF-203ENST00000479537 EBPQ15125 230 aaKnown RBP2.54□□□□□ -2
BRAF-203ENST00000479537 LCE1CQ5T751 118 aa2.54□□□□□ -2
BRAF-203ENST00000479537 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
BRAF-203ENST00000479537 SLC51BQ86UW2 128 aa2.54□□□□□ -2
BRAF-203ENST00000479537 UPK3BQ9BT76 320 aa2.54□□□□□ -2
BRAF-203ENST00000479537 TMEM109Q9BVC6 243 aa2.54□□□□□ -2
BRAF-203ENST00000479537 MAP1LC3AQ9H492 121 aa2.54□□□□□ -2
BRAF-203ENST00000479537 SLC2A9Q9NRM0 540 aa2.54□□□□□ -2
BRAF-203ENST00000479537 POLR3HQ9Y535 204 aaPredicted RBP2.54□□□□□ -2
BRAF-203ENST00000479537 DENND4CQ5VZ89 1909 aa2.53□□□□□ -2
BRAF-203ENST00000479537 TRAV17A0A0B4J275 112 aa2.53□□□□□ -2
BRAF-203ENST00000479537 A0A0J9YX75 114 aa2.53□□□□□ -2
BRAF-203ENST00000479537 GRIFINA4D1Z8 144 aa2.53□□□□□ -2
BRAF-203ENST00000479537 C19orf71A6NCJ1 209 aa2.53□□□□□ -2
BRAF-203ENST00000479537 M0R381 172 aa2.53□□□□□ -2
BRAF-203ENST00000479537 UBFD1O14562 309 aaKnown RBP2.53□□□□□ -2
BRAF-203ENST00000479537 SLC16A4O15374 487 aa2.53□□□□□ -2
BRAF-203ENST00000479537 ZNF7P17097 686 aaPredicted RBP2.53□□□□□ -2
BRAF-203ENST00000479537 NPPCP23582 126 aa2.53□□□□□ -2
BRAF-203ENST00000479537 CXCR4P61073 352 aa2.53□□□□□ -2
BRAF-203ENST00000479537 BTN3A2P78410 334 aa2.53□□□□□ -2
BRAF-203ENST00000479537 HLA-DRB3P79483 266 aa2.53□□□□□ -2
BRAF-203ENST00000479537 JOSD1Q15040 202 aaPredicted RBP2.53□□□□□ -2
BRAF-203ENST00000479537 OGFRL1Q5TC84 451 aaPredicted RBP2.53□□□□□ -2
BRAF-203ENST00000479537 AMTNQ6UX39 209 aa2.53□□□□□ -2
BRAF-203ENST00000479537 COMMD7Q86VX2 200 aa2.53□□□□□ -2
BRAF-203ENST00000479537 C1orf174Q8IYL3 243 aa2.53□□□□□ -2
BRAF-203ENST00000479537 LRRC34Q8IZ02 419 aa2.53□□□□□ -2
BRAF-203ENST00000479537 ZNF567Q8N184 647 aa2.53□□□□□ -2
BRAF-203ENST00000479537 TMEM156Q8N614 296 aa2.53□□□□□ -2
BRAF-203ENST00000479537 OR2D3Q8NGH3 330 aa2.53□□□□□ -2
BRAF-203ENST00000479537 OR4C16Q8NGL9 310 aa2.53□□□□□ -2
BRAF-203ENST00000479537 FNDC9Q8TBE3 224 aa2.53□□□□□ -2
BRAF-203ENST00000479537 C16orf78Q8WTQ4 265 aa2.53□□□□□ -2
BRAF-203ENST00000479537 NKX6-2Q9C056 277 aaPredicted RBP2.53□□□□□ -2
BRAF-203ENST00000479537 TCEAL2Q9H3H9 227 aaPredicted RBP2.53□□□□□ -2
BRAF-203ENST00000479537 HES4Q9HCC6 221 aa2.53□□□□□ -2
BRAF-203ENST00000479537 PCYT1BQ9Y5K3 369 aaPredicted RBP2.53□□□□□ -2
BRAF-203ENST00000479537 TACC2O95359 2948 aa2.53□□□□□ -2
BRAF-203ENST00000479537 MYH10P35580 1976 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 PIN1P1O15428 100 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 CRHBPP24387 322 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 SERPINB10P48595 397 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 TFAMQ00059 246 aaKnown RBP2.52□□□□□ -2.01
BRAF-203ENST00000479537 FOXF1Q12946 379 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 ZNF181Q2M3W8 571 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 CDKL4Q5MAI5 379 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 PIGXQ8TBF5 258 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 EEF1AKMT1Q8WVE0 214 aa2.52□□□□□ -2.01
BRAF-203ENST00000479537 C12orf43Q96C57 262 aaKnown RBP2.52□□□□□ -2.01
BRAF-203ENST00000479537 MS4A6EQ96DS6 147 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms