RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 IAPPP10997 89 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 HTR2BP41595 481 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 DEFA1P59665 94 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 DEFA3P59666 94 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 TATDN3Q17R31 274 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 NRARPQ7Z6K4 114 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 SLC24A4Q8NFF2 622 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 BSCL2Q96G97 398 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-215ENST00000478531 MAGT1Q9H0U3 335 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 PPP1R14DQ9NXH3 145 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 CACFD1Q9UGQ2 172 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 PAIP2BQ9ULR5 123 aaKnown RBP5.27□□□□□ -1.57
BRCA1-215ENST00000478531 PRELID1Q9Y255 219 aa5.27□□□□□ -1.57
BRCA1-215ENST00000478531 IGHV3OR16-8A0A075B7F1 116 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 CCSO14618 274 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 EDN2P20800 178 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 NPY1RP25929 384 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 EGFEM1PQ0D2K5 195 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 PDLIM3Q53GG5 364 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-215ENST00000478531 SMUG1Q53HV7 270 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 MITD1Q8WV92 249 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 PRR25Q96S07 402 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 CHRDL1Q9BU40 450 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 PEMTQ9UBM1 199 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 SELENOKQ9Y6D0 94 aa5.26□□□□□ -1.57
BRCA1-215ENST00000478531 F8W735 103 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-215ENST00000478531 CORTO00230 105 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 WIPF1O43516 503 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 GNG7O60262 68 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 PITX3O75364 302 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 SLC25A6P12236 298 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 INSL3P51460 131 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 MFAP4P55083 255 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 IAH1Q2TAA2 248 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-215ENST00000478531 BSXQ3C1V8 233 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 FAM106AQ4KMX7 169 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 UNQ9165/PRO28630Q6UXU0 137 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 MRAPQ8TCY5 172 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 ZNF431Q8TF32 576 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-215ENST00000478531 CACNG8Q8WXS5 425 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 CLUHP3Q96NS8 147 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 WI2-2373I1.2A0A1W2PRP0 233 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 C2orf70A6NJV1 201 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 FAM90A26D6RGX4 464 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 H3BP45 60 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 WRBO00258 174 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 NUPL2O15504 423 aaKnown RBP5.25□□□□□ -1.57
BRCA1-215ENST00000478531 ZNF207O43670 478 aaKnown RBP5.25□□□□□ -1.57
BRCA1-215ENST00000478531 SSSCA1O60232 199 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 MED6O75586 246 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 YIF1AO95070 293 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 CSN3P07498 182 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 SPNP16150 400 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 ADMP35318 185 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 MLANAQ16655 118 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 C2orf83Q53S99 150 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 WDR73Q6P4I2 378 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 SPSB3Q6PJ21 355 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 IL34Q6ZMJ4 242 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 GPHB5Q86YW7 130 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 DUSP18Q8NEJ0 188 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 DYNLRB2Q8TF09 96 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 TMEM170AQ8WVE7 144 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 OR10C1Q96KK4 312 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 C20orf24Q9BUV8 137 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 FNDC4Q9H6D8 234 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-215ENST00000478531 GSKIPQ9P0R6 139 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 U3KQ87 197 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 NBEAL2Q6ZNJ1 2754 aa5.25□□□□□ -1.57
BRCA1-215ENST00000478531 RPS10-NUDT3A0A1W2PQS6 291 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 C5orf51A6NDU8 294 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 J3QL48 77 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 LGALS9O00182 355 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 SYNGR2O43760 224 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 IFNA4P05014 189 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 CTSGP08311 255 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 FOLR2P14207 255 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 NKX2-1P43699 371 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 NPBWR1P48145 328 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 PRR20EP86478 221 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 PRR20CP86479 221 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 PRR20DP86480 221 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 PRR20BP86481 221 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 PRR20AP86496 221 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 REC114Q7Z4M0 266 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 C12orf45Q8N5I9 185 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 PALMDQ9NP74 551 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 GAR1Q9NY12 217 aaKnown RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 MRPL36Q9P0J6 103 aaKnown RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 ZNF256Q9Y2P7 627 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 TMEM213A2RRL7 107 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 A8MWP6 167 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 INMT-MINDY4F8WBC2 141 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 K7EIL1 84 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 IGLV1-51P01701 117 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 RND2P52198 227 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 POLR2GP62487 172 aaKnown RBP eCLIP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 DEFB121Q5J5C9 76 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 SPANXN5Q5MJ07 72 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 PVRIGQ6DKI7 326 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms