RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TCRBV4S1A1TA0A5B7 111 aa11.02□□□□□ -0.64
BRCA1-209ENST00000470026 ZNF705FA8MVS1 300 aaPredicted RBP11.02□□□□□ -0.64
BRCA1-209ENST00000470026 M0R143 59 aa11.02□□□□□ -0.64
BRCA1-209ENST00000470026 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.64
BRCA1-209ENST00000470026 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.64
BRCA1-209ENST00000470026 CD33P20138 364 aa11.02□□□□□ -0.64
BRCA1-209ENST00000470026 DLX6P56179 175 aa11.02□□□□□ -0.64
BRCA1-209ENST00000470026 FXYD3Q14802 87 aa11.02□□□□□ -0.64
BRCA1-209ENST00000470026 MRGPRG-AS1Q2M3A8 158 aa11.02□□□□□ -0.64
BRCA1-209ENST00000470026 WIPF2Q8TF74 440 aaPredicted RBP11.02□□□□□ -0.64
BRCA1-209ENST00000470026 PPIAL4EA0A075B759 164 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 IZUMO1RA6ND01 250 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 PPIAL4DF5H284 164 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 BMPR1BO00238 502 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 CACNA1HO95180 2353 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 PPIAL4FP0DN26 164 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 BRS3P32247 399 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 MYCNOSP40205 109 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 RASL11AQ6T310 242 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 TOMM20LQ6UXN7 152 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 Q8N976 141 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 ZNF355PQ9NSJ1 428 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 PPIAL4AQ9Y536 164 aa11.02□□□□□ -0.65
BRCA1-209ENST00000470026 C16orf97H3BN30 126 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 REG1AP05451 166 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 CRYGCP07315 174 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 CDKN1AP38936 164 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 DIAPH2-AS1Q14236 149 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 ZNF329Q86UD4 541 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 WASHC3Q9Y3C0 194 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 ICE1Q9Y2F5 2266 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 NBEAQ8NFP9 2946 aa11.01□□□□□ -0.65
BRCA1-209ENST00000470026 A0A0G2JNJ9 132 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 COX7A2P2O60397 106 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 THBDP07204 575 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 SUB1P53999 127 aaKnown RBP eCLIP11□□□□□ -0.65
BRCA1-209ENST00000470026 TDRG1Q3Y452 100 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 NPIPB3Q92617 1050 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 FXYD5Q96DB9 178 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 MIEN1Q9BRT3 115 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 PAXXQ9BUH6 204 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 JKAMPQ9P055 326 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 KAAG1Q9UBP8 84 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 Q9UFV3 132 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 FBXL7Q9UJT9 491 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 AMMECR1Q9Y4X0 333 aaPredicted RBP11□□□□□ -0.65
BRCA1-209ENST00000470026 RNF114Q9Y508 228 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 REG1BP48304 166 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 TDGF1P3P51864 188 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 BPIFB3P59826 476 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 C10orf55Q5SWW7 151 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 SSX8Q7RTT4 187 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 ZCCHC24Q8N2G6 241 aaKnown RBP11□□□□□ -0.65
BRCA1-209ENST00000470026 OR10X1Q8NGY0 326 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 KCNS1Q96KK3 526 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 SAMD10Q9BYL1 202 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 C7orf69Q9H7B7 122 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 SAP30LQ9HAJ7 183 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 MRPL36Q9P0J6 103 aaKnown RBP11□□□□□ -0.65
BRCA1-209ENST00000470026 ZFHX4Q86UP3 3567 aa11□□□□□ -0.65
BRCA1-209ENST00000470026 PEX7O00628 323 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 PYYP10082 97 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 MGST1P10620 155 aaKnown RBP10.99□□□□□ -0.65
BRCA1-209ENST00000470026 LOXP28300 417 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-209ENST00000470026 TMEM183BQ1AE95 376 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 TMEM155Q4W5P6 130 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 SIGLECL1Q8N7X8 197 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 CTSZQ9UBR2 303 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 A0A1W2PPI3 338 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 A0A1W2PS18 150 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 M0QZK8 103 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 TCAPO15273 167 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 NDUFB3O43676 98 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 SPINK4O60575 86 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 MC5RP33032 325 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 TCL1AP56279 114 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 PAX2Q02962 417 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 BSPH1Q075Z2 132 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 LRRC10Q5BKY1 277 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 LYPD2Q6UXB3 125 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 ASCL5Q7RTU5 278 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 WFDC8Q8IUA0 241 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 FAM168AQ92567 244 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 LINC00479Q96M42 142 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 ZNF586Q9NXT0 402 aa10.99□□□□□ -0.65
BRCA1-209ENST00000470026 LGALS7P47929 136 aa10.98□□□□□ -0.65
BRCA1-209ENST00000470026 KIAA1644Q3SXP7 199 aa10.98□□□□□ -0.65
BRCA1-209ENST00000470026 VMA21Q3ZAQ7 101 aa10.98□□□□□ -0.65
BRCA1-209ENST00000470026 SMIM12Q96EX1 92 aa10.98□□□□□ -0.65
BRCA1-209ENST00000470026 GRAMD2BQ96HH9 432 aa10.98□□□□□ -0.65
BRCA1-209ENST00000470026 RCHY1Q96PM5 261 aa10.98□□□□□ -0.65
BRCA1-209ENST00000470026 MRPL27Q9P0M9 148 aaKnown RBP10.98□□□□□ -0.65
BRCA1-209ENST00000470026 IGLC7A0M8Q6 106 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 SRIP30626 198 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 SLC35B1P78383 322 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
BRCA1-209ENST00000470026 C11orf42Q8N5U0 333 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 VN1R17PQ8TDU5 208 aa10.97□□□□□ -0.65
BRCA1-209ENST00000470026 NRN1Q9NPD7 142 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms