RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 A0A1B0GVG6 124 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 FAM24AA6NFZ4 105 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 LINC01619G3V211 115 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 L7N2F9 121 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 CORTO00230 105 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 TSC22D2O75157 780 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 MPC2O95563 127 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 HSPB1P04792 205 aaKnown RBP11.36□□□□□ -0.59
COL9A3-209ENST00000469852 IFNA4P05014 189 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 CLEC3BP05452 202 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 METTL15P1P0C7V9 234 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 TAS2R30P59541 319 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 VAMP2P63027 116 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 ZNF616Q08AN1 781 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 Q5BKY6 102 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 HAPLN4Q86UW8 402 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 UBAC2Q8NBM4 344 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 OR4F4Q96R69 305 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 CHRDL1Q9BU40 450 aa11.36□□□□□ -0.59
COL9A3-209ENST00000469852 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 IGSF23A1L1A6 192 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 PF4P02776 101 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 HOXD3P31249 432 aaPredicted RBP11.35□□□□□ -0.59
COL9A3-209ENST00000469852 ADMP35318 185 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 ARL3P36405 182 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 MYCNOSP40205 109 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 ATP5IP56385 69 aaPredicted RBP11.35□□□□□ -0.59
COL9A3-209ENST00000469852 RAB11AP62491 216 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 CD69Q07108 199 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 Q56UQ5 140 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 OR8G2PQ6IF36 304 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 ACSM6Q6P461 480 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 PRSS54Q6PEW0 395 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 SLC16A13Q7RTY0 426 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 NOXA1Q86UR1 476 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 LINC00482Q8N8I6 264 aa11.35□□□□□ -0.59
COL9A3-209ENST00000469852 RANGRFQ9HD47 186 aaPredicted RBP11.35□□□□□ -0.59
COL9A3-209ENST00000469852 IGHV3-35A0A0C4DH35 117 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 TGOLN2O43493 480 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 LY86O95711 162 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 GIPP09681 153 aaPredicted RBP11.34□□□□□ -0.59
COL9A3-209ENST00000469852 BCAP31P51572 246 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 CAV2P51636 162 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 RND2P52198 227 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 MFAP4P55083 255 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 RPP30P78346 268 aaKnown RBP11.34□□□□□ -0.59
COL9A3-209ENST00000469852 DPF1Q92782 380 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
COL9A3-209ENST00000469852 LYRM2Q9NU23 88 aaPredicted RBP11.34□□□□□ -0.59
COL9A3-209ENST00000469852 MBD2Q9UBB5 411 aa11.34□□□□□ -0.59
COL9A3-209ENST00000469852 MGAM2Q2M2H8 2515 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 RPS10-NUDT3A0A1W2PQS6 291 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 G3V3Q6 166 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 OR2C1O95371 312 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 CTSGP08311 255 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 PVALBP20472 110 aaPredicted RBP11.33□□□□□ -0.6
COL9A3-209ENST00000469852 FCGR2BP31994 310 aaPredicted RBP11.33□□□□□ -0.6
COL9A3-209ENST00000469852 GAMTQ14353 236 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 ACOT7LQ6ZUV0 252 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 TMEM252Q8N6L7 170 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 OR4X1Q8NH49 305 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 DCUN1D4Q92564 292 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 BSCL2Q96G97 398 aaPredicted RBP11.33□□□□□ -0.6
COL9A3-209ENST00000469852 ACY3Q96HD9 319 aa11.33□□□□□ -0.6
COL9A3-209ENST00000469852 E5RGE8 158 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 SMLR1H3BR10 107 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 CLN5O75503 358 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 CST7O76096 145 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 RLN2P04090 185 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 SLC25A4P12235 298 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 PRR31Q5SQ13 230 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 TMEM116Q8NCL8 245 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 NPIPB3Q92617 1050 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 TXN2Q99757 166 aa11.32□□□□□ -0.6
COL9A3-209ENST00000469852 GNG7O60262 68 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 GGCTO75223 188 aaKnown RBP11.31□□□□□ -0.6
COL9A3-209ENST00000469852 LYL1P12980 280 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 GPX4P36969 197 aaPredicted RBP11.31□□□□□ -0.6
COL9A3-209ENST00000469852 P2RY1P47900 373 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 NPBWR1P48145 328 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 SYNJ2BPP57105 145 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 RAP2BP61225 183 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 KLF5Q13887 457 aaPredicted RBP11.31□□□□□ -0.6
COL9A3-209ENST00000469852 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 TIGITQ495A1 244 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 FAM209BQ5JX69 171 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 ATP6V0BQ99437 205 aa11.31□□□□□ -0.6
COL9A3-209ENST00000469852 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 IGKV1OR2-108A0A075B7D4 117 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 IGKV1-17P01599 117 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 IGLC1P0CG04 106 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 EDN2P20800 178 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 ZP3P21754 424 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 EWSR1Q01844 656 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL9A3-209ENST00000469852 NHLH2Q02577 135 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 UNQ9165/PRO28630Q6UXU0 137 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms