RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RARRES2Q99969 163 aa17.93■□□□□ 0.46
PTCH1-210ENST00000468211 RAB3DO95716 219 aa17.92■□□□□ 0.46
PTCH1-210ENST00000468211 DEFB131AP59861 70 aa17.92■□□□□ 0.46
PTCH1-210ENST00000468211 PAFAH1B2P68402 229 aa17.92■□□□□ 0.46
PTCH1-210ENST00000468211 FAAP20Q6NZ36 180 aa17.92■□□□□ 0.46
PTCH1-210ENST00000468211 ZFAND1Q8TCF1 268 aa17.92■□□□□ 0.46
PTCH1-210ENST00000468211 GATAD1Q8WUU5 269 aa17.92■□□□□ 0.46
PTCH1-210ENST00000468211 PDCD10Q9BUL8 212 aa17.92■□□□□ 0.46
PTCH1-210ENST00000468211 KLK5Q9Y337 293 aaPredicted RBP17.92■□□□□ 0.46
PTCH1-210ENST00000468211 ATG12O94817 140 aa17.91■□□□□ 0.46
PTCH1-210ENST00000468211 RPL11P62913 178 aaKnown RBP17.91■□□□□ 0.46
PTCH1-210ENST00000468211 BSXQ3C1V8 233 aa17.91■□□□□ 0.46
PTCH1-210ENST00000468211 CCDC71LQ8N9Z2 235 aa17.91■□□□□ 0.46
PTCH1-210ENST00000468211 OR11H2Q8NH07 326 aa17.91■□□□□ 0.46
PTCH1-210ENST00000468211 LHFPL5Q8TAF8 219 aa17.91■□□□□ 0.46
PTCH1-210ENST00000468211 DNASE2O00115 360 aaPredicted RBP17.9■□□□□ 0.46
PTCH1-210ENST00000468211 CORTO00230 105 aa17.9■□□□□ 0.46
PTCH1-210ENST00000468211 CLN5O75503 358 aa17.9■□□□□ 0.46
PTCH1-210ENST00000468211 CD5P06127 495 aa17.9■□□□□ 0.46
PTCH1-210ENST00000468211 SUB1P53999 127 aaKnown RBP eCLIP17.9■□□□□ 0.46
PTCH1-210ENST00000468211 TAS2R19P59542 299 aa17.9■□□□□ 0.46
PTCH1-210ENST00000468211 NANOS2P60321 138 aaKnown RBP17.9■□□□□ 0.46
PTCH1-210ENST00000468211 STEAP1BQ6NZ63 245 aa17.9■□□□□ 0.46
PTCH1-210ENST00000468211 RRNAD1Q96FB5 475 aaKnown RBP17.9■□□□□ 0.46
PTCH1-210ENST00000468211 RTBDNQ9BSG5 229 aaPredicted RBP17.9■□□□□ 0.46
PTCH1-210ENST00000468211 DEFB4AO15263 64 aa17.89■□□□□ 0.45
PTCH1-210ENST00000468211 CA1P00915 261 aaPredicted RBP17.89■□□□□ 0.45
PTCH1-210ENST00000468211 OR5AC1P0C628 307 aa17.89■□□□□ 0.45
PTCH1-210ENST00000468211 OPRK1P41145 380 aa17.89■□□□□ 0.45
PTCH1-210ENST00000468211 RPP25LQ8N5L8 163 aaKnown RBP17.89■□□□□ 0.45
PTCH1-210ENST00000468211 OR4X1Q8NH49 305 aa17.89■□□□□ 0.45
PTCH1-210ENST00000468211 GLYATL2Q8WU03 294 aa17.89■□□□□ 0.45
PTCH1-210ENST00000468211 TMEM222Q9H0R3 208 aa17.89■□□□□ 0.45
PTCH1-210ENST00000468211 GABARAPH6UMI1 98 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 CTDSP2O14595 271 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 CDS2O95674 445 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 IGKV1-17P01599 117 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 NPPCP23582 126 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 RPL5P46777 297 aaKnown RBP17.88■□□□□ 0.45
PTCH1-210ENST00000468211 TIGITQ495A1 244 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 AARDQ4LEZ3 155 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 RNASE11Q8TAA1 199 aaKnown RBP17.88■□□□□ 0.45
PTCH1-210ENST00000468211 ENY2Q9NPA8 101 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 RABAC1Q9UI14 185 aa17.88■□□□□ 0.45
PTCH1-210ENST00000468211 TRAV2A0A0B4J234 112 aa17.87■□□□□ 0.45
PTCH1-210ENST00000468211 CRYBB3P26998 211 aa17.87■□□□□ 0.45
PTCH1-210ENST00000468211 C11orf68Q9H3H3 251 aaKnown RBP17.87■□□□□ 0.45
PTCH1-210ENST00000468211 K7EQG2 157 aa17.86■□□□□ 0.45
PTCH1-210ENST00000468211 GIG44P09565 113 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-210ENST00000468211 SPCS3P61009 180 aa17.86■□□□□ 0.45
PTCH1-210ENST00000468211 SELENOHQ8IZQ5 122 aaKnown RBP17.86■□□□□ 0.45
PTCH1-210ENST00000468211 C11orf45Q8TAV5 145 aa17.86■□□□□ 0.45
PTCH1-210ENST00000468211 C15orf40Q8WUR7 153 aa17.86■□□□□ 0.45
PTCH1-210ENST00000468211 TMEM231Q9H6L2 316 aa17.86■□□□□ 0.45
PTCH1-210ENST00000468211 TEX13DA0A0J9YY54 714 aaPredicted RBP17.85■□□□□ 0.45
PTCH1-210ENST00000468211 RGS5O15539 181 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 DEDDO75618 318 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 P2RY1P47900 373 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 TMEM187Q14656 261 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 SPCS2Q15005 226 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 RBMS2Q15434 407 aaKnown RBP17.85■□□□□ 0.45
PTCH1-210ENST00000468211 STXBP6Q8NFX7 210 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 TMEM230Q96A57 120 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 GPR146Q96CH1 333 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 METTL26Q96S19 204 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 NAA60Q9H7X0 242 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.85■□□□□ 0.45
PTCH1-210ENST00000468211 CACNG5Q9UF02 275 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 FBXL17Q9UF56 701 aa17.85■□□□□ 0.45
PTCH1-210ENST00000468211 B3GALNT1O75752 331 aa17.84■□□□□ 0.45
PTCH1-210ENST00000468211 MEF2DQ14814 521 aa17.84■□□□□ 0.45
PTCH1-210ENST00000468211 FAM219AQ8IW50 185 aa17.84■□□□□ 0.45
PTCH1-210ENST00000468211 OR52E5Q8NH55 327 aa17.84■□□□□ 0.45
PTCH1-210ENST00000468211 TMEM170AQ8WVE7 144 aa17.84■□□□□ 0.45
PTCH1-210ENST00000468211 RBPMSQ93062 196 aaKnown RBP17.84■□□□□ 0.45
PTCH1-210ENST00000468211 C14orf166Q9Y224 244 aaKnown RBP17.84■□□□□ 0.45
PTCH1-210ENST00000468211 DNAH10Q8IVF4 4471 aa17.83■□□□□ 0.44
PTCH1-210ENST00000468211 A0A1W2PS18 150 aa17.83■□□□□ 0.44
PTCH1-210ENST00000468211 SSBP1Q04837 148 aaKnown RBP17.83■□□□□ 0.44
PTCH1-210ENST00000468211 TRPT1Q86TN4 253 aaKnown RBP17.83■□□□□ 0.44
PTCH1-210ENST00000468211 STHQ8IWL8 128 aa17.83■□□□□ 0.44
PTCH1-210ENST00000468211 OR4C16Q8NGL9 310 aa17.83■□□□□ 0.44
PTCH1-210ENST00000468211 SMIM4Q8WVI0 70 aa17.83■□□□□ 0.44
PTCH1-210ENST00000468211 GPR132Q9UNW8 380 aa17.83■□□□□ 0.44
PTCH1-210ENST00000468211 U3KQE9 123 aa17.83■□□□□ 0.44
PTCH1-210ENST00000468211 KNCNA6PVL3 124 aa17.82■□□□□ 0.44
PTCH1-210ENST00000468211 ZNF688P0C7X2 276 aa17.82■□□□□ 0.44
PTCH1-210ENST00000468211 IGLC1P0CG04 106 aa17.82■□□□□ 0.44
PTCH1-210ENST00000468211 HTR2BP41595 481 aa17.82■□□□□ 0.44
PTCH1-210ENST00000468211 ALDH3B2P48448 385 aa17.82■□□□□ 0.44
PTCH1-210ENST00000468211 PRSS54Q6PEW0 395 aa17.82■□□□□ 0.44
PTCH1-210ENST00000468211 DCANP1Q8TF63 244 aa17.82■□□□□ 0.44
PTCH1-210ENST00000468211 HEYLQ9NQ87 328 aaPredicted RBP17.82■□□□□ 0.44
PTCH1-210ENST00000468211 VPS13DQ5THJ4 4388 aa17.82■□□□□ 0.44
PTCH1-210ENST00000468211 CRYM-AS1A6NIL9 109 aa17.81■□□□□ 0.44
PTCH1-210ENST00000468211 NXPH3O95157 252 aa17.81■□□□□ 0.44
PTCH1-210ENST00000468211 RND2P52198 227 aa17.81■□□□□ 0.44
PTCH1-210ENST00000468211 MRPS10P82664 201 aaKnown RBP17.81■□□□□ 0.44
PTCH1-210ENST00000468211 C2orf83Q53S99 150 aa17.81■□□□□ 0.44
PTCH1-210ENST00000468211 TMEM268Q5VZI3 342 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms