RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 MDKP21741 143 aaPredicted RBP6.27□□□□□ -1.41
USP4-207ENST00000462673 OR10J1P30954 320 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 GNG10P50151 68 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 CNN1P51911 297 aaKnown RBP6.27□□□□□ -1.41
USP4-207ENST00000462673 FGF8P55075 233 aaPredicted RBP6.27□□□□□ -1.41
USP4-207ENST00000462673 RPL23P62829 140 aaKnown RBP6.27□□□□□ -1.41
USP4-207ENST00000462673 SLC38A11Q08AI6 406 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 KLRD1Q13241 179 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 ZNF726P1Q15940 193 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 C1orf194Q5T5A4 169 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 TPTE2P1Q5T6R2 138 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 RUSC1-AS1Q66K80 236 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 HCP5Q6MZN7 132 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 FAM71F2Q6NXP2 309 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 SLC25A48Q6ZT89 311 aaKnown RBP6.27□□□□□ -1.41
USP4-207ENST00000462673 CENPVQ7Z7K6 275 aaPredicted RBP6.27□□□□□ -1.41
USP4-207ENST00000462673 LYG1Q8N1E2 194 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 NECAP1Q8NC96 275 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 OR51G1Q8NGK1 321 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 OR2T10Q8NGZ9 312 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 OR1L1Q8NH94 360 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 AJUBAQ96IF1 538 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 RSG1Q9BU20 258 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 SNHG12Q9BXW3 62 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 RBKSQ9H477 322 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 FKBP11Q9NYL4 201 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 PSENENQ9NZ42 101 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 C1RLQ9NZP8 487 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 ZNRD1Q9P1U0 126 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 FUT9Q9Y231 359 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 ARHGAP32A7KAX9 2087 aa6.27□□□□□ -1.41
USP4-207ENST00000462673 TET2Q6N021 2002 aaPredicted RBP6.26□□□□□ -1.41
USP4-207ENST00000462673 WNK2Q9Y3S1 2297 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 TRAV9-1A0A075B6T8 112 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 IGHV3-43A0A0B4J1X8 118 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 RNF212BA8MTL3 300 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 H3BP45 60 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 DLEU1O43261 78 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 SYNGR2O43760 224 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 NXPH3O95157 252 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 TMEM50AO95807 157 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 SERPINE2P07093 398 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 IGHV3-43DP0DP04 118 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 F2RP25116 425 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 G0S2P27469 103 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
USP4-207ENST00000462673 PAX9P55771 341 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 ZNF816Q0VGE8 651 aaPredicted RBP6.26□□□□□ -1.41
USP4-207ENST00000462673 FOXL1Q12952 345 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 TMEM183BQ1AE95 376 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 SSX7Q7RTT5 188 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 MOB3BQ86TA1 216 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.26□□□□□ -1.41
USP4-207ENST00000462673 OR52L2PQ8NGH6 319 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 OR10V1Q8NGI7 309 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 OR4P4Q8NGL7 312 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 TAF15Q92804 592 aaKnown RBP eCLIP6.26□□□□□ -1.41
USP4-207ENST00000462673 RPUSD4Q96CM3 377 aaKnown RBP6.26□□□□□ -1.41
USP4-207ENST00000462673 IMMP2LQ96T52 175 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 TMEM147Q9BVK8 224 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 WDR61Q9GZS3 305 aaKnown RBP6.26□□□□□ -1.41
USP4-207ENST00000462673 PARLQ9H300 379 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 SLC39A9Q9NUM3 307 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 VPREB3Q9UKI3 123 aa6.26□□□□□ -1.41
USP4-207ENST00000462673 IGKV1D-13A0A0B4J2D9 117 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 DNAJC9-AS1A6NH13 148 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 F6UZH7 168 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 LY6LH3BQJ8 138 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 H3BUX3 64 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 SOX15O60248 233 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 SCGB1D1O95968 90 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 IGHV3-7P01780 117 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 IGKV1-13P0DP09 117 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 IAPPP10997 89 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 ZNF25P17030 456 aaPredicted RBP6.25□□□□□ -1.41
USP4-207ENST00000462673 CD1BP29016 333 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 GPR12P47775 334 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 ZNF137PP52743 207 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 TPPP2P59282 170 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 PRB3Q04118 309 aaPredicted RBP6.25□□□□□ -1.41
USP4-207ENST00000462673 ATP6V1FQ16864 119 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 CT45A1Q5HYN5 189 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 TEX38Q6PEX7 206 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 Q6ZPA2 131 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 LHFPL4Q7Z7J7 247 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 ZBTB34Q8NCN2 500 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 OR4F5Q8NH21 305 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 CT45A3Q8NHU0 189 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 LEAP2Q969E1 77 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 GPR146Q96CH1 333 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 ADTRPQ96IZ2 230 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 ZNF48Q96MX3 618 aaPredicted RBP6.25□□□□□ -1.41
USP4-207ENST00000462673 RNF5Q99942 180 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 C20orf144Q9BQM9 153 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 NPFFR1Q9GZQ6 430 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 SLC25A22Q9H936 323 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 CCL28Q9NRJ3 127 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 CACNG5Q9UF02 275 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 GOLT1BQ9Y3E0 138 aa6.25□□□□□ -1.41
USP4-207ENST00000462673 OR2W1Q9Y3N9 320 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms