RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 TCL1AP56279 114 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 HIST3H2BBQ8N257 126 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 OR10J5Q8NHC4 309 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 C4orf3Q8WVX3 66 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 H1FXQ92522 213 aaKnown RBP0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 TOMM6Q96B49 74 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 CMTM6Q9NX76 183 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 ERGIC3Q9Y282 383 aa0.18□□□□□ -2.38
SCARNA18-201ENST00000459004 DPRXA6NFQ7 191 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 ZNF736B4DX44 427 aaPredicted RBP0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 DCTN3O75935 186 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 HLA-DRB1P01911 266 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 PRH1P02810 166 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 C3orf56Q8N813 242 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 SLC35B4Q969S0 331 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 NIPSNAP1Q9BPW8 284 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 COMMD5Q9GZQ3 224 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 C11orf68Q9H3H3 251 aaKnown RBP0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 ECM29Q5VYK3 1845 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 KCPQ6ZWJ8 1503 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 KMT2DO14686 5537 aa0.17□□□□□ -2.38
SCARNA18-201ENST00000459004 TRAV9-1A0A075B6T8 112 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 LINC00854A0A1B0GVQ3 168 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 CCDC160A6NGH7 325 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 BUB1B-PAK6H3BSN5 160 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 PSMD12O00232 456 aaPredicted RBP0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 SNRPD2P62316 118 aaKnown RBP0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 TEX261Q6UWH6 196 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 PATE1Q8WXA2 126 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 ITFG2Q969R8 447 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 OR52E6Q96RD3 313 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 SMR3AQ99954 134 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 NHP2Q9NX24 153 aaKnown RBP0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 SLC35A3Q9Y2D2 325 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 U3KQ87 197 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 RP1P56715 2156 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 PCLOQ9Y6V0 5065 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 NUP155O75694 1391 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 SBF1O95248 1867 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 MDN1Q9NU22 5596 aa0.16□□□□□ -2.38
SCARNA18-201ENST00000459004 DENND4CQ5VZ89 1909 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 EXOC1LA0A1B0GW35 172 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 HIST1H1TP22492 207 aaPredicted RBP0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 EFNA4P52798 201 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 CDC42P60953 191 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 HIST3H3Q16695 136 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 DEFB113Q30KQ7 82 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 HIST2H3PS2Q5TEC6 136 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 C20orf196Q8IYI0 205 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 TMEM86BQ8N661 226 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 GPR146Q96CH1 333 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 NKIRAS1Q9NYS0 192 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 TMEM56-RWDD3S4R434 201 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 MAP3K5Q99683 1374 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 CNTRLQ7Z7A1 2325 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 TAF1LQ8IZX4 1826 aa0.15□□□□□ -2.39
SCARNA18-201ENST00000459004 RYR1P21817 5038 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 CALB1P05937 261 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 CD79AP11912 226 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 PSME3P61289 254 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 PSG9Q00887 426 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 SPRNQ5BIV9 151 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 TRAPPC6BQ86SZ2 158 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 GKN2Q86XP6 184 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 ANKRD29Q8N6D5 301 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 OR13D1Q8NGV5 346 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 CFAP53Q96M91 514 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 OSTCQ9NRP0 149 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 SNAPC4Q5SXM2 1469 aa0.14□□□□□ -2.39
SCARNA18-201ENST00000459004 HECW1Q76N89 1606 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 TRAV3A0A0B4J244 114 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 FAAHO00519 579 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 DNAL4O96015 105 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 TNNC2P02585 160 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 S100A4P26447 101 aaKnown RBP0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 RPL5P46777 297 aaKnown RBP0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 SPCS3P61009 180 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 LINC00301Q8NCQ3 95 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 TEX47Q8TBZ9 253 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 PTH2Q96A98 100 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 TSPAN32Q96QS1 320 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 MRPS26Q9BYN8 205 aaKnown RBP0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 OR51V1Q9H2C8 321 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 ATP6V1DQ9Y5K8 247 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 NEO1Q92859 1461 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
SCARNA18-201ENST00000459004 DOCK5Q9H7D0 1870 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 C7orf71A4D174 169 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 CCL25O15444 150 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 TGOLN2O43493 480 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 OR2J2O76002 312 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 TPM3P06753 285 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 OR2F1Q13607 317 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 FAM74A1Q5RGS3 127 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 SPOPLQ6IQ16 392 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 LINC00322Q6ZN03 302 aaPredicted RBP0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 C20orf27Q9GZN8 174 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 DCSTAMPQ9H295 470 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 NIT2Q9NQR4 276 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 EPDR1Q9UM22 224 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms