RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 NINJ1Q92982 152 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 GALMQ96C23 342 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 Q9UFV3 132 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 V9GYV3 84 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 MALRD1Q5VYJ5 2156 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 CRYBG3Q68DQ2 2970 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 H0Y8G0 127 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 M0R1X1 148 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 DLL1O00548 723 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 GUSBP1Q15486 140 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 SRSF7Q16629 238 aaKnown RBP eCLIP11.15□□□□□ -0.62
TOP3B-213ENST00000457179 SSMEM1Q8WWF3 244 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 EAF1Q96JC9 268 aaPredicted RBP11.15□□□□□ -0.62
TOP3B-213ENST00000457179 TNCP24821 2201 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 TRAV8-6A0A0B4J262 113 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 hDV102S1A0JD36 115 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 C17orf98A8MV24 154 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 CORTO00230 105 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 ERVK11-1P61568 191 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 PDLIM3Q53GG5 364 aaPredicted RBP11.15□□□□□ -0.62
TOP3B-213ENST00000457179 MIC13Q5XKP0 118 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 IGFL3Q6UXB1 125 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 LHFPL4Q7Z7J7 247 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 C5orf30Q96GV9 206 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 GNG12Q9UBI6 72 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 PSG11Q9UQ72 335 aa11.15□□□□□ -0.62
TOP3B-213ENST00000457179 CFAP46Q8IYW2 2715 aa11.15□□□□□ -0.63
TOP3B-213ENST00000457179 APCSP02743 223 aa11.15□□□□□ -0.63
TOP3B-213ENST00000457179 UBE2G1P62253 170 aa11.15□□□□□ -0.63
TOP3B-213ENST00000457179 TBR1Q16650 682 aa11.15□□□□□ -0.63
TOP3B-213ENST00000457179 WDR73Q6P4I2 378 aa11.15□□□□□ -0.63
TOP3B-213ENST00000457179 SPATA12Q7Z6I5 190 aa11.15□□□□□ -0.63
TOP3B-213ENST00000457179 Q8NA96 180 aa11.15□□□□□ -0.63
TOP3B-213ENST00000457179 CXXC4Q9H2H0 198 aa11.15□□□□□ -0.63
TOP3B-213ENST00000457179 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 TRBV9A0A0B4J1U6 114 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 PIGBOS1A0A0B4J2F0 54 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 PMS2P5A8MQ11 134 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 NPY1RP25929 384 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 NHLH1Q02575 133 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 BVES-AS1Q5T3Y7 98 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 PQLC2Q6ZP29 291 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 C11orf53Q8IXP5 236 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 OR13A1Q8NGR1 328 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 LRRK2Q5S007 2527 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 TMEM30CPA0ZSE6 113 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 FAM90A27PA6NNH2 459 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 MT-ND6P03923 174 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 CD1BP29016 333 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 GPR6P46095 362 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-213ENST00000457179 SLAQ13239 276 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 SVIPQ8NHG7 77 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 FAM57AQ8TBR7 257 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 COQ2Q96H96 371 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 OR8B2Q96RD0 313 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-213ENST00000457179 POLQO75417 2590 aa11.14□□□□□ -0.63
TOP3B-213ENST00000457179 SAA2-SAA4A0A096LPE2 208 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 TRBV6-6A0A0A6YYG2 114 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-213ENST00000457179 LRRC30A6NM36 301 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 USF1P22415 310 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-213ENST00000457179 GNG4P50150 75 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 CX3CL1P78423 397 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 SPATA31B1PQ5VZV4 182 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 TMEM108Q6UXF1 575 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
TOP3B-213ENST00000457179 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-213ENST00000457179 PRB3Q04118 309 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-213ENST00000457179 ZNF146Q15072 292 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 Q8IYB0 196 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 NHLRC2Q8NBF2 726 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 OR4P4Q8NGL7 312 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 C18orf32Q8TCD1 76 aa11.13□□□□□ -0.63
TOP3B-213ENST00000457179 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
TOP3B-213ENST00000457179 SSBP3Q9BWW4 388 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-213ENST00000457179 A0A087X0K7 114 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 OR4C46A6NHA9 309 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 H0YJW9 148 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 PRDX2P32119 198 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 ACP7Q6ZNF0 438 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 MOB1BQ7L9L4 216 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 OR2T6Q8NHC8 308 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 CCL17Q92583 94 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.12□□□□□ -0.63
TOP3B-213ENST00000457179 MRPL27Q9P0M9 148 aaKnown RBP11.12□□□□□ -0.63
TOP3B-213ENST00000457179 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 SNAI2O43623 268 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 FOXH1O75593 365 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 AMY1AP04745 511 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 RPL8P62917 257 aaKnown RBP11.12□□□□□ -0.63
TOP3B-213ENST00000457179 SMIM21Q3B7S5 101 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 TIMM23BQ5SRD1 257 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 IGF2-ASQ6U949 168 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 GCM1Q9NP62 436 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 C16orf97H3BN30 126 aa11.12□□□□□ -0.63
TOP3B-213ENST00000457179 GNG7O60262 68 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms