RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 SLC17A3O00476 420 aa14.34□□□□□ -0.11
CLDN9-201ENST00000445369 FSTL3O95633 263 aa14.34□□□□□ -0.11
CLDN9-201ENST00000445369 GNG4P50150 75 aa14.34□□□□□ -0.11
CLDN9-201ENST00000445369 YPEL3P61236 119 aaPredicted RBP14.34□□□□□ -0.11
CLDN9-201ENST00000445369 MUC15Q8N387 334 aa14.34□□□□□ -0.11
CLDN9-201ENST00000445369 TEX45Q8NA69 505 aa14.34□□□□□ -0.11
CLDN9-201ENST00000445369 MRPL36Q9P0J6 103 aaKnown RBP14.34□□□□□ -0.11
CLDN9-201ENST00000445369 TRAV5A0A0B4J249 113 aa14.33□□□□□ -0.12
CLDN9-201ENST00000445369 IGLC7A0M8Q6 106 aa14.33□□□□□ -0.12
CLDN9-201ENST00000445369 ENSAO43768 121 aaKnown RBP14.33□□□□□ -0.12
CLDN9-201ENST00000445369 CRYGBP07316 175 aa14.33□□□□□ -0.12
CLDN9-201ENST00000445369 GRNP28799 593 aaKnown RBP14.33□□□□□ -0.12
CLDN9-201ENST00000445369 CASP6P55212 293 aa14.33□□□□□ -0.12
CLDN9-201ENST00000445369 DLX1P56177 255 aa14.33□□□□□ -0.12
CLDN9-201ENST00000445369 PVRIGQ6DKI7 326 aa14.33□□□□□ -0.12
CLDN9-201ENST00000445369 V9GYV3 84 aa14.33□□□□□ -0.12
CLDN9-201ENST00000445369 PLXNB1O43157 2135 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 REG1AP05451 166 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 RD3LP0DJH9 198 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 ZNF90Q03938 601 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 OR5I1Q13606 314 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 OR1L4Q8NGR5 311 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 OR5R1Q8NH85 324 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 RAXQ9Y2V3 346 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 TRAV20A0A0B4J274 112 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 COX7A2P2O60397 106 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 IGHV3-48P01763 117 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 PRRX1P54821 245 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 SUMO1P63165 101 aaKnown RBP14.32□□□□□ -0.12
CLDN9-201ENST00000445369 UBE2L3P68036 154 aaKnown RBP14.32□□□□□ -0.12
CLDN9-201ENST00000445369 JOSD1Q15040 202 aaPredicted RBP14.32□□□□□ -0.12
CLDN9-201ENST00000445369 MMD2Q8IY49 270 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 OR5AU1Q8NGC0 362 aa14.32□□□□□ -0.12
CLDN9-201ENST00000445369 CRYGCP07315 174 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 LGALS4P56470 323 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 BPIFB3P59826 476 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 ERVFC1-1P60608 527 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 SELENOTP62341 195 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 MALRD1Q5VYJ5 2156 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 C10orf113Q5VZT2 155 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 PATE2Q6UY27 113 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 BEND2Q8NDZ0 799 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 CLEC7AQ9BXN2 247 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 ZNF355PQ9NSJ1 428 aa14.31□□□□□ -0.12
CLDN9-201ENST00000445369 IGHV1-3A0A0C4DH29 117 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 BUB1B-PAK6H3BSN5 160 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 RBP4P02753 201 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 CNTFRP26992 372 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 SSX2Q16385 188 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 RPEL1Q2QD12 228 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 ZNF672Q499Z4 452 aaPredicted RBP14.3□□□□□ -0.12
CLDN9-201ENST00000445369 IGF2BP2-AS1Q96M15 143 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 IGLV2-8P01709 118 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 ADMP35318 185 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 RPL27AP46776 148 aaKnown RBP14.3□□□□□ -0.12
CLDN9-201ENST00000445369 MFAP2P55001 183 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 PRB3Q04118 309 aaPredicted RBP14.3□□□□□ -0.12
CLDN9-201ENST00000445369 MRPL41Q8IXM3 137 aaKnown RBP14.3□□□□□ -0.12
CLDN9-201ENST00000445369 CEP295Q9C0D2 2601 aa14.3□□□□□ -0.12
CLDN9-201ENST00000445369 GCGP01275 180 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 GZMBP10144 247 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 UCNP55089 124 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 TNXAQ16473 311 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 TIGITQ495A1 244 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 ETFRF1Q6IPR1 90 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 GBGT1Q8N5D6 347 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 C8orf46Q8TAG6 207 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 TMEM18Q96B42 140 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 SIGLEC9Q9Y336 463 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 PPIAL4CA0A0B4J2A2 164 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 C22orf46C9J442 243 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 PPIAL4GP0DN37 164 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 PYYP10082 97 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 C9orf152Q5JTZ5 239 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 RUSC1-AS1Q66K80 236 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 HCP5Q6MZN7 132 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 PAXXQ9BUH6 204 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 OSTCQ9NRP0 149 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 INSIG2Q9Y5U4 225 aa14.29□□□□□ -0.12
CLDN9-201ENST00000445369 CCL21O00585 134 aa14.28□□□□□ -0.12
CLDN9-201ENST00000445369 CBLN1P23435 193 aa14.28□□□□□ -0.12
CLDN9-201ENST00000445369 COMPP49747 757 aaPredicted RBP14.28□□□□□ -0.12
CLDN9-201ENST00000445369 ST6GALNAC3Q8NDV1 305 aa14.28□□□□□ -0.12
CLDN9-201ENST00000445369 TLN1Q9Y490 2541 aaKnown RBP14.28□□□□□ -0.12
CLDN9-201ENST00000445369 MISP3Q96FF7 219 aa14.27□□□□□ -0.12
CLDN9-201ENST00000445369 ISLRO14498 428 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 MOSP00540 346 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 COX7A1P24310 79 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 PAX2Q02962 417 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 FAM209BQ5JX69 171 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 FXYD5Q96DB9 178 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 TRGV9Q99603 122 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 RNASE7Q9H1E1 156 aaKnown RBP14.27□□□□□ -0.13
CLDN9-201ENST00000445369 TNFRSF19Q9NS68 423 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 CDC42EP3Q9UKI2 254 aa14.27□□□□□ -0.13
CLDN9-201ENST00000445369 TAS2R60P59551 318 aa14.26□□□□□ -0.13
CLDN9-201ENST00000445369 CDSNQ15517 529 aa14.26□□□□□ -0.13
CLDN9-201ENST00000445369 C19orf35Q6ZS72 473 aa14.26□□□□□ -0.13
CLDN9-201ENST00000445369 LINC00305Q7Z4B0 112 aa14.26□□□□□ -0.13
CLDN9-201ENST00000445369 OR1L6Q8NGR2 347 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms