RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CSTL1Q9H114 145 aa13.63□□□□□ -0.23
AC004540.1-201ENST00000439120 IGHV3-66A0A0C4DH42 116 aa13.62□□□□□ -0.23
AC004540.1-201ENST00000439120 MPTX1A8MV57 137 aa13.62□□□□□ -0.23
AC004540.1-201ENST00000439120 OR5AC1P0C628 307 aa13.62□□□□□ -0.23
AC004540.1-201ENST00000439120 IL18Q14116 193 aa13.62□□□□□ -0.23
AC004540.1-201ENST00000439120 FAM90A2PQ658T7 463 aa13.62□□□□□ -0.23
AC004540.1-201ENST00000439120 NARS2Q96I59 477 aaKnown RBP13.62□□□□□ -0.23
AC004540.1-201ENST00000439120 ZFAND3Q9H8U3 227 aa13.62□□□□□ -0.23
AC004540.1-201ENST00000439120 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.62□□□□□ -0.23
AC004540.1-201ENST00000439120 A0A0G2JRQ6 117 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 RPS10-NUDT3A0A1W2PQS6 291 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 A0A1W2PS18 150 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 CTDSP2O14595 271 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 NPPCP23582 126 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 SPCS3P61009 180 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 SPCS2Q15005 226 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 SURF2Q15527 256 aaPredicted RBP13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 SMIM4Q8WVI0 70 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 RBPMSQ93062 196 aaKnown RBP13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 TMEM230Q96A57 120 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 DIRAS2Q96HU8 199 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 METTL26Q96S19 204 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 MS4A6AQ9H2W1 248 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 VSIRQ9H7M9 311 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 NAA60Q9H7X0 242 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 HEYLQ9NQ87 328 aaPredicted RBP13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 DNAH1Q9P2D7 4330 aa13.61□□□□□ -0.23
AC004540.1-201ENST00000439120 A0A1B0GU03 582 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 CLN5O75503 358 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 DFFBO76075 338 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 CDS2O95674 445 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 APOHP02749 345 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 AKAIN1P0CW23 69 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 ATF4P18848 351 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 HTR2BP41595 481 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 EWSR1Q01844 656 aaKnown RBP eCLIP13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 DHODHQ02127 395 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 PVRIGQ6DKI7 326 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 CLVS1Q8IUQ0 354 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 OR4X1Q8NH49 305 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 GATAD1Q8WUU5 269 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 PRRT1Q99946 306 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 RABL2AQ9UBK7 228 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 RABAC1Q9UI14 185 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 RABL2BQ9UNT1 228 aa13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 KLK5Q9Y337 293 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-201ENST00000439120 CEBPZOSA8MTT3 80 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 LY6G6CO95867 125 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 RPL5P46777 297 aaKnown RBP13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 ALDH3B2P48448 385 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 TMEM268Q5VZI3 342 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 CEMP1Q6PRD7 247 aaPredicted RBP13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 OR4C16Q8NGL9 310 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 OR52E5Q8NH55 327 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 LINC00476Q8WZB0 136 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 RARRES2Q99969 163 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 RTBDNQ9BSG5 229 aaPredicted RBP13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 FNDC4Q9H6D8 234 aaPredicted RBP13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 CACNG5Q9UF02 275 aa13.59□□□□□ -0.23
AC004540.1-201ENST00000439120 TRAV30A0A087WSZ9 112 aa13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 TRAV2A0A0B4J234 112 aa13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 NOL3O60936 208 aaKnown RBP13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 CA1P00915 261 aaPredicted RBP13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 DEFB131AP59861 70 aa13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 Q6ZRM9 215 aa13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 LILRB2Q8N423 598 aa13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 GLYATL2Q8WU03 294 aa13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 RAB2BQ8WUD1 216 aa13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 GRAMD2BQ96HH9 432 aa13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 CCDC59Q9P031 241 aaKnown RBP13.58□□□□□ -0.24
AC004540.1-201ENST00000439120 CRYM-AS1A6NIL9 109 aa13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 CTDSPLO15194 276 aa13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 MLANAQ16655 118 aa13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 BSXQ3C1V8 233 aa13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 LEMD1Q68G75 181 aa13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 STHQ8IWL8 128 aa13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 SELENOHQ8IZQ5 122 aaKnown RBP13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 STXBP6Q8NFX7 210 aa13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 LHFPL5Q8TAF8 219 aa13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 MRPL36Q9P0J6 103 aaKnown RBP13.57□□□□□ -0.24
AC004540.1-201ENST00000439120 P2RY1P47900 373 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 EIF2B2P49770 351 aaKnown RBP13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 TIGITQ495A1 244 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 AARDQ4LEZ3 155 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 SLC24A4Q8NFF2 622 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 OR51S1Q8NGJ8 323 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 OR11H2Q8NH07 326 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 RNASEH2CQ8TDP1 164 aaKnown RBP13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 GPR146Q96CH1 333 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 SCGB3A2Q96PL1 93 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 CACFD1Q9UGQ2 172 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 SCP2D1Q9UJQ7 156 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 GPR132Q9UNW8 380 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 KCNIP3Q9Y2W7 256 aa13.56□□□□□ -0.24
AC004540.1-201ENST00000439120 NXPH3O95157 252 aa13.55□□□□□ -0.24
AC004540.1-201ENST00000439120 SLC25A4P12235 298 aa13.55□□□□□ -0.24
AC004540.1-201ENST00000439120 TMBIM6P55061 237 aa13.55□□□□□ -0.24
AC004540.1-201ENST00000439120 TMEM187Q14656 261 aa13.55□□□□□ -0.24
AC004540.1-201ENST00000439120 C2orf83Q53S99 150 aa13.55□□□□□ -0.24
AC004540.1-201ENST00000439120 ETFRF1Q6IPR1 90 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms