RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 A0A1B0GWJ7 208 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 H0YJW9 148 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 CEACAM4O75871 244 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 TOX4O94842 621 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 AMTP48728 403 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 PDLIM4P50479 330 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 VMA21Q3ZAQ7 101 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 C2orf83Q53S99 150 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 DNLZQ5SXM8 178 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 ST6GALNAC3Q8NDV1 305 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 BET1LQ9NYM9 111 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 BPIFB3P59826 476 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 SSBP2P81877 361 aaPredicted RBP13.6□□□□□ -0.23
TTC3-209ENST00000438055 PRR31Q5SQ13 230 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 MORN5Q5VZ52 161 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 VSTM2AQ8TAG5 236 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 NDUFAF3Q9BU61 184 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 E7EUB6 86 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 F2Z2F3 143 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 USF1P22415 310 aaPredicted RBP13.6□□□□□ -0.23
TTC3-209ENST00000438055 PLGLAQ15195 96 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 TNXAQ16473 311 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 ATG101Q9BSB4 218 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 SLC25A33Q9BSK2 321 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 A0A1W2PN81 502 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 C9JCJ5 164 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 C22orf15Q8WYQ4 148 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 TMEM106BQ9NUM4 274 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 AMMECR1Q9Y4X0 333 aaPredicted RBP13.6□□□□□ -0.23
TTC3-209ENST00000438055 SPTAN1Q13813 2472 aaKnown RBP13.6□□□□□ -0.23
TTC3-209ENST00000438055 CACNA1BQ00975 2339 aa13.6□□□□□ -0.23
TTC3-209ENST00000438055 UBE2G1P62253 170 aa13.59□□□□□ -0.23
TTC3-209ENST00000438055 ZNF430Q9H8G1 570 aaPredicted RBP13.59□□□□□ -0.23
TTC3-209ENST00000438055 COX7A1P24310 79 aa13.59□□□□□ -0.23
TTC3-209ENST00000438055 LGALS4P56470 323 aa13.59□□□□□ -0.23
TTC3-209ENST00000438055 POU2AF1Q16633 256 aa13.59□□□□□ -0.23
TTC3-209ENST00000438055 IGFL3Q6UXB1 125 aa13.59□□□□□ -0.23
TTC3-209ENST00000438055 CEACAM8P31997 349 aaPredicted RBP13.59□□□□□ -0.23
TTC3-209ENST00000438055 CAMPP49913 170 aa13.59□□□□□ -0.23
TTC3-209ENST00000438055 WASHC3Q9Y3C0 194 aa13.59□□□□□ -0.23
TTC3-209ENST00000438055 ADGRG4Q8IZF6 3080 aa13.59□□□□□ -0.23
TTC3-209ENST00000438055 V9GYV3 84 aa13.58□□□□□ -0.23
TTC3-209ENST00000438055 SLC25A5P05141 298 aaKnown RBP13.58□□□□□ -0.24
TTC3-209ENST00000438055 SRIP30626 198 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 YPEL3P61236 119 aaPredicted RBP13.58□□□□□ -0.24
TTC3-209ENST00000438055 C11orf52Q96A22 123 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 NCOR1P1Q9H4R4 102 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 ZNF586Q9NXT0 402 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 ANKHD1Q8IWZ3 2542 aaKnown RBP13.58□□□□□ -0.24
TTC3-209ENST00000438055 LYNX1G3V0Z9 82 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 LYNX1P0DP58 116 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 C19orf35Q6ZS72 473 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 TMEM68Q96MH6 324 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 TPSG1Q9NRR2 321 aa13.58□□□□□ -0.24
TTC3-209ENST00000438055 MFAP2P55001 183 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 GNG5P63218 68 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 WT1-ASQ06250 92 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 MEF2CQ06413 473 aaPredicted RBP13.57□□□□□ -0.24
TTC3-209ENST00000438055 OR1L4Q8NGR5 311 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 ZNF503Q96F45 646 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 G0S2P27469 103 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 TMEM178BH3BS89 294 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 LINC00305Q7Z4B0 112 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 VAMP8Q9BV40 100 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 GNB4Q9HAV0 340 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 NDUFA4L2Q9NRX3 87 aa13.57□□□□□ -0.24
TTC3-209ENST00000438055 POLR3KQ9Y2Y1 108 aaPredicted RBP13.57□□□□□ -0.24
TTC3-209ENST00000438055 EREGO14944 169 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 PAFAH1B2P68402 229 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 TEX36Q5VZQ5 186 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 WDR73Q6P4I2 378 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 ZNF833PQ6ZTB9 187 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 CACNG8Q8WXS5 425 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 FNDC4Q9H6D8 234 aaPredicted RBP13.56□□□□□ -0.24
TTC3-209ENST00000438055 NGBQ9NPG2 151 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 TNFRSF19Q9NS68 423 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 A0A1W2PRE2 83 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 TMEM30BQ3MIR4 351 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 TMEM186Q96B77 213 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 C19orf24Q9BVV8 132 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 DMXL2Q8TDJ6 3036 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 PRB4P10163 310 aaPredicted RBP13.56□□□□□ -0.24
TTC3-209ENST00000438055 PDPNQ86YL7 162 aa13.56□□□□□ -0.24
TTC3-209ENST00000438055 BRS3P32247 399 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 LEMD1Q68G75 181 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 Q6ZWC4 215 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 NUP37Q8NFH4 326 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 ZNF835Q9Y2P0 537 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 PTPRBP23467 1997 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 AKAP13Q12802 2813 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 CDKN1AP38936 164 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 OR5AN1Q8NGI8 311 aa13.55□□□□□ -0.24
TTC3-209ENST00000438055 FAM19A2Q8N3H0 131 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 RNASE6Q93091 150 aaKnown RBP13.54□□□□□ -0.24
TTC3-209ENST00000438055 RNF2Q99496 336 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 MRPL32Q9BYC8 188 aaKnown RBP13.54□□□□□ -0.24
TTC3-209ENST00000438055 OSTCQ9NRP0 149 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 FNDC10F2Z333 226 aa13.54□□□□□ -0.24
TTC3-209ENST00000438055 TIMM8BQ9Y5J9 83 aaPredicted RBP13.54□□□□□ -0.24
TTC3-209ENST00000438055 TANC2Q9HCD6 1990 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms