RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 ASCC3Q8N3C0 2202 aaKnown RBP0.18□□□□□ -2.38
LINC01239-201ENST00000433645 DOCK5Q9H7D0 1870 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 FRAS1Q86XX4 4008 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 TRAV1-1A0A0B4J248 108 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 NCR3O14931 201 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 PROSCO94903 275 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 DEXIO95424 95 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 HIST3H3Q16695 136 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 BPIFA4PQ86YQ2 179 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 CLVS1Q8IUQ0 354 aaPredicted RBP0.17□□□□□ -2.38
LINC01239-201ENST00000433645 C20orf196Q8IYI0 205 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 BORCS5Q969J3 196 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 SLC35B4Q969S0 331 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 IMP4Q96G21 291 aaKnown RBP0.17□□□□□ -2.38
LINC01239-201ENST00000433645 TMEM147Q9BVK8 224 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 XPNPEP1Q9NQW7 623 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 TP73-AS1Q9UF72 201 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 KIAA1549Q9HCM3 1950 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 NUP155O75694 1391 aa0.17□□□□□ -2.38
LINC01239-201ENST00000433645 EVC2Q86UK5 1308 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 ZNF736B4DX44 427 aaPredicted RBP0.16□□□□□ -2.38
LINC01239-201ENST00000433645 EEF1E1-BLOC1S5C9J1V9 151 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 HIST3H2BBQ8N257 126 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 C3orf56Q8N813 242 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 H1FXQ92522 213 aaKnown RBP0.16□□□□□ -2.38
LINC01239-201ENST00000433645 C20orf27Q9GZN8 174 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 COMMD5Q9GZQ3 224 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 DRC3Q9H069 523 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 CACNA1EQ15878 2313 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 DOCK3Q8IZD9 2030 aa0.16□□□□□ -2.38
LINC01239-201ENST00000433645 SCN10AQ9Y5Y9 1956 aa0.15□□□□□ -2.38
LINC01239-201ENST00000433645 ECM29Q5VYK3 1845 aa0.15□□□□□ -2.38
LINC01239-201ENST00000433645 DPRXA6NFQ7 191 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 SULT1B1O43704 296 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 HLA-DRB1P01911 266 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 CDC42SE1Q9NRR8 79 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 SLC39A9Q9NUM3 307 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 ERGIC3Q9Y282 383 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 TMEM56-RWDD3S4R434 201 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 NEO1Q92859 1461 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 TAF1LQ8IZX4 1826 aa0.15□□□□□ -2.39
LINC01239-201ENST00000433645 CASP8AP2Q9UKL3 1982 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 KMT2DO14686 5537 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 ZNF25P17030 456 aaPredicted RBP0.14□□□□□ -2.39
LINC01239-201ENST00000433645 HIST1H1TP22492 207 aaPredicted RBP0.14□□□□□ -2.39
LINC01239-201ENST00000433645 CDC42P60953 191 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 PSME3P61289 254 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 MAGOHP61326 146 aaKnown RBP0.14□□□□□ -2.39
LINC01239-201ENST00000433645 SNRPD2P62316 118 aaKnown RBP0.14□□□□□ -2.39
LINC01239-201ENST00000433645 RNASE10Q5GAN6 216 aaKnown RBP0.14□□□□□ -2.39
LINC01239-201ENST00000433645 LPCAT4Q643R3 524 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 TEX47Q8TBZ9 253 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 DNAJC9Q8WXX5 260 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 KLK6Q92876 244 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 SLC35A3Q9Y2D2 325 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 FAT4Q6V0I7 4981 aa0.14□□□□□ -2.39
LINC01239-201ENST00000433645 ASH1LQ9NR48 2969 aaKnown RBP0.13□□□□□ -2.39
LINC01239-201ENST00000433645 TRAV9-1A0A075B6T8 112 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 EXOC1LA0A1B0GW35 172 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 BUB1B-PAK6H3BSN5 160 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 PSMD12O00232 456 aaPredicted RBP0.13□□□□□ -2.39
LINC01239-201ENST00000433645 MGST1P10620 155 aaKnown RBP0.13□□□□□ -2.39
LINC01239-201ENST00000433645 EFNA4P52798 201 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 TCL1AP56279 114 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 PSG9Q00887 426 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 TRAPPC6BQ86SZ2 158 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 TMEM86BQ8N661 226 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 OR13D1Q8NGV5 346 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 GPR146Q96CH1 333 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 ALPK3Q96L96 1907 aa0.13□□□□□ -2.39
LINC01239-201ENST00000433645 ZNF106Q9H2Y7 1883 aaKnown RBP0.12□□□□□ -2.39
LINC01239-201ENST00000433645 SNAPC4Q5SXM2 1469 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 PQLC2LA1A4F0 135 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 C7orf71A4D174 169 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 FAAHO00519 579 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 CD79AP11912 226 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 OR2F1Q13607 317 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 TEX261Q6UWH6 196 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 LCA10Q71F78 164 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 PATE1Q8WXA2 126 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 PTH2Q96A98 100 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 CFAP53Q96M91 514 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 TSPAN32Q96QS1 320 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 PRRT1Q99946 306 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 DCSTAMPQ9H295 470 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 C11orf68Q9H3H3 251 aaKnown RBP0.12□□□□□ -2.39
LINC01239-201ENST00000433645 CMTM6Q9NX76 183 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 NKIRAS1Q9NYS0 192 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 EPDR1Q9UM22 224 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 U3KQ87 197 aa0.12□□□□□ -2.39
LINC01239-201ENST00000433645 MYO18AQ92614 2054 aaKnown RBP0.11□□□□□ -2.39
LINC01239-201ENST00000433645 YPEL3P61236 119 aaPredicted RBP0.11□□□□□ -2.39
LINC01239-201ENST00000433645 HIST2H3PS2Q5TEC6 136 aa0.11□□□□□ -2.39
LINC01239-201ENST00000433645 GKN2Q86XP6 184 aa0.11□□□□□ -2.39
LINC01239-201ENST00000433645 OR51D1Q8NGF3 324 aa0.11□□□□□ -2.39
LINC01239-201ENST00000433645 OSTCQ9NRP0 149 aa0.11□□□□□ -2.39
LINC01239-201ENST00000433645 ATP6V1DQ9Y5K8 247 aa0.11□□□□□ -2.39
LINC01239-201ENST00000433645 PLXND1Q9Y4D7 1925 aa0.11□□□□□ -2.39
LINC01239-201ENST00000433645 MYO3BQ8WXR4 1341 aa0.11□□□□□ -2.39
LINC01239-201ENST00000433645 LINC00854A0A1B0GVQ3 168 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms