RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 GPR107Q5VW38 600 aa8.5□□□□□ -1.05
SQSTM1-203ENST00000422245 FAM219AQ8IW50 185 aa8.5□□□□□ -1.05
SQSTM1-203ENST00000422245 GBGT1Q8N5D6 347 aa8.5□□□□□ -1.05
SQSTM1-203ENST00000422245 OR4D10Q8NGI6 311 aa8.5□□□□□ -1.05
SQSTM1-203ENST00000422245 ABHD1Q96SE0 405 aa8.5□□□□□ -1.05
SQSTM1-203ENST00000422245 C11orf68Q9H3H3 251 aaKnown RBP8.5□□□□□ -1.05
SQSTM1-203ENST00000422245 A0A1B0GU03 582 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 A0A1W2PS18 150 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 GABARAPH6UMI1 98 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 DNASE2O00115 360 aaPredicted RBP8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 CLN5O75503 358 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 TMEM50AO95807 157 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 RPL5P46777 297 aaKnown RBP8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 SURF2Q15527 256 aaPredicted RBP8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 BSXQ3C1V8 233 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 SP6Q3SY56 376 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 AARDQ4LEZ3 155 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 STEAP1BQ6NZ63 245 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 OR4X1Q8NH49 305 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 METTL26Q96S19 204 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 RARRES2Q99969 163 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 MFFQ9GZY8 342 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 TMEM222Q9H0R3 208 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 MS4A6AQ9H2W1 248 aa8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 C14orf166Q9Y224 244 aaKnown RBP8.49□□□□□ -1.05
SQSTM1-203ENST00000422245 A0A0G2JRQ6 117 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 RPS10-NUDT3A0A1W2PQS6 291 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 CA1P00915 261 aaPredicted RBP8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 APOHP02749 345 aaPredicted RBP8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 NPPCP23582 126 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 ETV6P41212 452 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 SPCS3P61009 180 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 OR52E5Q8NH55 327 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 MARCH1Q8TCQ1 289 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 SMIM4Q8WVI0 70 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 NARS2Q96I59 477 aaKnown RBP8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 FNDC4Q9H6D8 234 aaPredicted RBP8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 NAA60Q9H7X0 242 aa8.48□□□□□ -1.05
SQSTM1-203ENST00000422245 TRAV30A0A087WSZ9 112 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 IGHV3-66A0A0C4DH42 116 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 TEX13DA0A0J9YY54 714 aaPredicted RBP8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 DISC1C4P0D8 188 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 RGS5O15539 181 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 CDS2O95674 445 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 OR5AC1P0C628 307 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 CRYBB3P26998 211 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 HTR2BP41595 481 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 DEFB131AP59861 70 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 DHODHQ02127 395 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 GPR141Q7Z602 305 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 LILRB2Q8N423 598 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 OR11H2Q8NH07 326 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 PHLDA1Q8WV24 401 aaPredicted RBP8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 RBPMSQ93062 196 aaKnown RBP8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 GRAMD2BQ96HH9 432 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 MRPS26Q9BYN8 205 aaKnown RBP8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 MIXL1Q9H2W2 232 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 MRPL36Q9P0J6 103 aaKnown RBP8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 RABL2AQ9UBK7 228 aaPredicted RBP8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 CACFD1Q9UGQ2 172 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 RABAC1Q9UI14 185 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 RABL2BQ9UNT1 228 aa8.47□□□□□ -1.05
SQSTM1-203ENST00000422245 IGKV1-17P01599 117 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 SLC25A4P12235 298 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 P2RY1P47900 373 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 TMEM187Q14656 261 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 TMEM41BQ5BJD5 291 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 LEMD1Q68G75 181 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 FAAP20Q6NZ36 180 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 Q6ZRM9 215 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 STHQ8IWL8 128 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 STXBP6Q8NFX7 210 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 OR1S2Q8NGQ3 325 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 C11orf45Q8TAV5 145 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 RNASEH2CQ8TDP1 164 aaKnown RBP8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 GLYATL2Q8WU03 294 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 TMEM230Q96A57 120 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 PRRT1Q99946 306 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 HEYLQ9NQ87 328 aaPredicted RBP8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 CACNG5Q9UF02 275 aa8.46□□□□□ -1.06
SQSTM1-203ENST00000422245 K7EQG2 157 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 CTDSPLO15194 276 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 IGLC1P0CG04 106 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 AKAIN1P0CW23 69 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 EIF2B2P49770 351 aaKnown RBP8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 RBMS2Q15434 407 aaKnown RBP8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 TIGITQ495A1 244 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 C2orf83Q53S99 150 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 TMEM268Q5VZI3 342 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 SELENOHQ8IZQ5 122 aaKnown RBP8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 FAM24BQ8N5W8 94 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 SLC24A4Q8NFF2 622 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 LHFPL5Q8TAF8 219 aa8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 RTBDNQ9BSG5 229 aaPredicted RBP8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 CCDC59Q9P031 241 aaKnown RBP8.45□□□□□ -1.06
SQSTM1-203ENST00000422245 HELTA6NFD8 242 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 CRYM-AS1A6NIL9 109 aa8.44□□□□□ -1.06
SQSTM1-203ENST00000422245 CEBPZOSA8MTT3 80 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms