RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SPANXN1Q5VSR9 72 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 FAM53AQ6NSI3 398 aaPredicted RBP7.97□□□□□ -1.13
CMSS1-201ENST00000421999 LHFPL4Q7Z7J7 247 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 C11orf53Q8IXP5 236 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 LHFPL5Q8TAF8 219 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 PPP1R2P9O14990 202 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 IGFBP2P18065 325 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 DLK1P80370 383 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 LINC00305Q7Z4B0 112 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 OR10W1Q8NGF6 305 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 OR2D3Q8NGH3 330 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 SRD5A3Q9H8P0 318 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 SELENOKQ9Y6D0 94 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 C15orf61A6NNL5 157 aa7.96□□□□□ -1.13
CMSS1-201ENST00000421999 ZNF345Q14585 488 aa7.96□□□□□ -1.13
CMSS1-201ENST00000421999 SLC25A48Q6ZT89 311 aaKnown RBP7.96□□□□□ -1.13
CMSS1-201ENST00000421999 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.13
CMSS1-201ENST00000421999 OR51M1Q9H341 326 aa7.96□□□□□ -1.13
CMSS1-201ENST00000421999 PEMTQ9UBM1 199 aa7.96□□□□□ -1.13
CMSS1-201ENST00000421999 IGKV1-6A0A0C4DH72 117 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 CLDN34H7C241 214 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 MGPP08493 103 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 LMO1P25800 156 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 NUTF2P61970 127 aaKnown RBP7.96□□□□□ -1.14
CMSS1-201ENST00000421999 CX3CL1P78423 397 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 C5orf64Q2M2E5 130 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 CYP2G1PQ6ZSU1 146 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 HSBP1O75506 76 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 PDZD11Q5EBL8 140 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 Q8TCH9 128 aa7.96□□□□□ -1.14
CMSS1-201ENST00000421999 GPX1P07203 203 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 MYOD1P15172 320 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 CFHR2P36980 270 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 SUPT4H1P63272 117 aaKnown RBP7.95□□□□□ -1.14
CMSS1-201ENST00000421999 SRSF7Q16629 238 aaKnown RBP eCLIP7.95□□□□□ -1.14
CMSS1-201ENST00000421999 TBL2Q9Y4P3 447 aaKnown RBP7.95□□□□□ -1.14
CMSS1-201ENST00000421999 TRBV6-6A0A0A6YYG2 114 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 LOXP28300 417 aaPredicted RBP7.95□□□□□ -1.14
CMSS1-201ENST00000421999 MAS1LP35410 378 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 PRSS8Q16651 343 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 C12orf54Q6X4T0 127 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 FA2HQ7L5A8 372 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 IGHV1-69DA0A0B4J2H0 117 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 IGHV1-69P01742 117 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 ZP3P21754 424 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 UBE2E1P51965 193 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 C15orf32Q32M92 178 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 Q6ZSR3 168 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 TMEM37Q8WXS4 190 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 CACNG8Q8WXS5 425 aa7.95□□□□□ -1.14
CMSS1-201ENST00000421999 MBNL3Q9NUK0 354 aaKnown RBP7.95□□□□□ -1.14
CMSS1-201ENST00000421999 IGHV2-70DA0A0C4DH43 119 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 PDE6DO43924 150 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 ICAM4Q14773 271 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 FBXL19-AS1Q494R0 122 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 TMEM177Q53S58 311 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 LYPD6Q86Y78 171 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 RNASEH2CQ8TDP1 164 aaKnown RBP7.94□□□□□ -1.14
CMSS1-201ENST00000421999 AQP10Q96PS8 301 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 IGHV4-30-2A0A087WSY4 118 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 IGHV4-61A0A0C4DH41 118 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 NDUFB4O95168 129 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 CSN3P07498 182 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 CD55P08174 381 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 ARL14EPLP0DKL9 152 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 CD69Q07108 199 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 MRPL54Q6P161 138 aaKnown RBP7.94□□□□□ -1.14
CMSS1-201ENST00000421999 GOLT1AQ6ZVE7 132 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 ZNF383Q8NA42 475 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 HSPB7Q9UBY9 170 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 LOC102723971A0A1B0GUV8 181 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 FOXI3A8MTJ6 420 aaPredicted RBP7.94□□□□□ -1.14
CMSS1-201ENST00000421999 IL6RP08887 468 aaPredicted RBP7.94□□□□□ -1.14
CMSS1-201ENST00000421999 TSPOP30536 169 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 AANATQ16613 207 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 LY6G6FQ5SQ64 297 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 KIR3DL3Q8N743 410 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 KLHL30-AS1Q8NEE0 82 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 PRSS3P2Q8NHM4 247 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 NAT8Q9UHE5 227 aa7.94□□□□□ -1.14
CMSS1-201ENST00000421999 FCN1O00602 326 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 SAP30O75446 220 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 NBEAP1P0C6P0 100 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 TEX38Q6PEX7 206 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 ZNF843Q8N446 348 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 SH3BGRL3Q9H299 93 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 H0YJW9 148 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 BCL2P10415 239 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 PRCDQ00LT1 54 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 ZNF600Q6ZNG1 722 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 LCNL1Q6ZST4 164 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 LIME1Q9H400 295 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 RPRMQ9NS64 109 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 BET1LQ9NYM9 111 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 DSCAMO60469 2012 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 FAM181BA6NEQ2 426 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 MFSD2BA6NFX1 497 aa7.93□□□□□ -1.14
CMSS1-201ENST00000421999 LINC00473A8K010 186 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms