RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ADAP1O75689 374 aa11.18□□□□□ -0.62
LIMS1-206ENST00000414829 IFNA4P05014 189 aa11.18□□□□□ -0.62
LIMS1-206ENST00000414829 BMI1P35226 326 aa11.18□□□□□ -0.62
LIMS1-206ENST00000414829 IAH1Q2TAA2 248 aaPredicted RBP11.18□□□□□ -0.62
LIMS1-206ENST00000414829 C12orf45Q8N5I9 185 aaPredicted RBP11.18□□□□□ -0.62
LIMS1-206ENST00000414829 OR4X1Q8NH49 305 aa11.18□□□□□ -0.62
LIMS1-206ENST00000414829 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
LIMS1-206ENST00000414829 ZNF436Q9C0F3 470 aaPredicted RBP11.18□□□□□ -0.62
LIMS1-206ENST00000414829 TECRQ9NZ01 308 aaKnown RBP11.18□□□□□ -0.62
LIMS1-206ENST00000414829 ZNF256Q9Y2P7 627 aaPredicted RBP11.18□□□□□ -0.62
LIMS1-206ENST00000414829 IGHV3-21A0A0B4J1V1 117 aa11.17□□□□□ -0.62
LIMS1-206ENST00000414829 SNRPGP15A8MWD9 76 aa11.17□□□□□ -0.62
LIMS1-206ENST00000414829 PTTG1O95997 202 aa11.17□□□□□ -0.62
LIMS1-206ENST00000414829 IGLV1-51P01701 117 aa11.17□□□□□ -0.62
LIMS1-206ENST00000414829 IFITM3Q01628 133 aa11.17□□□□□ -0.62
LIMS1-206ENST00000414829 NRARPQ7Z6K4 114 aa11.17□□□□□ -0.62
LIMS1-206ENST00000414829 OR52B4Q8NGK2 314 aa11.17□□□□□ -0.62
LIMS1-206ENST00000414829 GINS3Q9BRX5 216 aa11.17□□□□□ -0.62
LIMS1-206ENST00000414829 AURKAIP1Q9NWT8 199 aaPredicted RBP11.17□□□□□ -0.62
LIMS1-206ENST00000414829 C2orf70A6NJV1 201 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 C15orf62A8K5M9 175 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 F8W735 103 aaPredicted RBP11.16□□□□□ -0.62
LIMS1-206ENST00000414829 INMT-MINDY4F8WBC2 141 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 CLN5O75503 358 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 SCAF4O95104 1147 aaKnown RBP11.16□□□□□ -0.62
LIMS1-206ENST00000414829 ID3Q02535 119 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 UXS1Q8NBZ7 420 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 TMEM116Q8NCL8 245 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 OR4D5Q8NGN0 318 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 RAB40CQ96S21 281 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 SEC22CQ9BRL7 303 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 MARVELD1Q9BSK0 173 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 ZC4H2Q9NQZ6 224 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 NOTCH1P46531 2555 aa11.16□□□□□ -0.62
LIMS1-206ENST00000414829 C5orf51A6NDU8 294 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 FABP1P07148 127 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 CSN3P07498 182 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 CTSGP08311 255 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 IAPPP10997 89 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 FOLR2P14207 255 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 TAS2R30P59541 319 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 IL34Q6ZMJ4 242 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 SLC16A13Q7RTY0 426 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 ZBTB8BQ8NAP8 495 aaPredicted RBP11.15□□□□□ -0.62
LIMS1-206ENST00000414829 OR1S2Q8NGQ3 325 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
LIMS1-206ENST00000414829 MRPL27Q9P0M9 148 aaKnown RBP11.15□□□□□ -0.62
LIMS1-206ENST00000414829 STRAPQ9Y3F4 350 aaKnown RBP11.15□□□□□ -0.62
LIMS1-206ENST00000414829 CMYA5Q8N3K9 4069 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 TMEM213A2RRL7 107 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 FAM25EA8MYX2 175 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 K7EMT4 169 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 YIF1AO95070 293 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 ADMP35318 185 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
LIMS1-206ENST00000414829 CD69Q07108 199 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 MRAPQ8TCY5 172 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 CHRDL1Q9BU40 450 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 C20orf24Q9BUV8 137 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 FNDC4Q9H6D8 234 aaPredicted RBP11.14□□□□□ -0.63
LIMS1-206ENST00000414829 GSKIPQ9P0R6 139 aa11.14□□□□□ -0.63
LIMS1-206ENST00000414829 PAIP2BQ9ULR5 123 aaKnown RBP11.14□□□□□ -0.63
LIMS1-206ENST00000414829 MPTX1A8MV57 137 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 SSSCA1O60232 199 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 SCGB1D2O95969 90 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 CD5P06127 495 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 PVALBP20472 110 aaPredicted RBP11.13□□□□□ -0.63
LIMS1-206ENST00000414829 CBLN1P23435 193 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 RND2P52198 227 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 KRTAP10-11P60412 298 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 NARS2Q96I59 477 aaKnown RBP11.13□□□□□ -0.63
LIMS1-206ENST00000414829 C2orf50Q96LR7 162 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 MAGT1Q9H0U3 335 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 TMEM231Q9H6L2 316 aa11.13□□□□□ -0.63
LIMS1-206ENST00000414829 TRAV25A0A0B4J276 109 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 TSC22D2O75157 780 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 TMEM50AO95807 157 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 GP9P14770 177 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 SPNP16150 400 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 OR10J1P30954 320 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 POLR2GP62487 172 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIMS1-206ENST00000414829 CYCSP99999 105 aaKnown RBP11.12□□□□□ -0.63
LIMS1-206ENST00000414829 SPANXN5Q5MJ07 72 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 TMEM170AQ8WVE7 144 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 ACY3Q96HD9 319 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 SMIM8Q96KF7 97 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 OR10C1Q96KK4 312 aa11.12□□□□□ -0.63
LIMS1-206ENST00000414829 L7N2F9 121 aa11.11□□□□□ -0.63
LIMS1-206ENST00000414829 CCSO14618 274 aa11.11□□□□□ -0.63
LIMS1-206ENST00000414829 C8orf88P0DMB2 117 aa11.11□□□□□ -0.63
LIMS1-206ENST00000414829 YPEL3P61236 119 aaPredicted RBP11.11□□□□□ -0.63
LIMS1-206ENST00000414829 VAMP2P63027 116 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms