RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 C11orf1Q9H5F2 150 aa23.49■■□□□ 1.35
CSNK1E-206ENST00000413574 MFAP4P55083 255 aa23.48■■□□□ 1.35
CSNK1E-206ENST00000413574 ATP5IP56385 69 aaPredicted RBP23.48■■□□□ 1.35
CSNK1E-206ENST00000413574 RAB11AP62491 216 aa23.48■■□□□ 1.35
CSNK1E-206ENST00000413574 RPP30P78346 268 aaKnown RBP23.48■■□□□ 1.35
CSNK1E-206ENST00000413574 DLX4Q92988 240 aaPredicted RBP23.48■■□□□ 1.35
CSNK1E-206ENST00000413574 LY86O95711 162 aa23.48■■□□□ 1.35
CSNK1E-206ENST00000413574 CYCSP99999 105 aaKnown RBP23.48■■□□□ 1.35
CSNK1E-206ENST00000413574 TREML4Q6UXN2 200 aa23.48■■□□□ 1.35
CSNK1E-206ENST00000413574 L7N2F9 121 aa23.47■■□□□ 1.35
CSNK1E-206ENST00000413574 OR2C1O95371 312 aa23.47■■□□□ 1.35
CSNK1E-206ENST00000413574 VAMP2P63027 116 aa23.47■■□□□ 1.35
CSNK1E-206ENST00000413574 PPP1R1CQ8WVI7 109 aa23.47■■□□□ 1.35
CSNK1E-206ENST00000413574 DCUN1D4Q92564 292 aa23.47■■□□□ 1.35
CSNK1E-206ENST00000413574 CHRDL1Q9BU40 450 aa23.47■■□□□ 1.35
CSNK1E-206ENST00000413574 CCNKO75909 580 aa23.46■■□□□ 1.35
CSNK1E-206ENST00000413574 TAS2R30P59541 319 aa23.46■■□□□ 1.35
CSNK1E-206ENST00000413574 RPEL1Q2QD12 228 aa23.46■■□□□ 1.35
CSNK1E-206ENST00000413574 IGHV3-35A0A0C4DH35 117 aa23.45■■□□□ 1.34
CSNK1E-206ENST00000413574 TGOLN2O43493 480 aa23.45■■□□□ 1.34
CSNK1E-206ENST00000413574 ZP3P21754 424 aa23.45■■□□□ 1.34
CSNK1E-206ENST00000413574 CD69Q07108 199 aa23.45■■□□□ 1.34
CSNK1E-206ENST00000413574 FAM209BQ5JX69 171 aa23.45■■□□□ 1.34
CSNK1E-206ENST00000413574 PRSS54Q6PEW0 395 aa23.45■■□□□ 1.34
CSNK1E-206ENST00000413574 RPS10-NUDT3A0A1W2PQS6 291 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 H0YIZ8 118 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 TSC22D2O75157 780 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 GGCTO75223 188 aaKnown RBP23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 METTL15P1P0C7V9 234 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 ADMP35318 185 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 TMEM14EPQ6UXP3 125 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 OR5AC2Q9NZP5 309 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 DEDDO75618 318 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 CTSGP08311 255 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 CD33P20138 364 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 FCGR2BP31994 310 aaPredicted RBP23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 SLC16A13Q7RTY0 426 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 BSCL2Q96G97 398 aaPredicted RBP23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 TXN2Q99757 166 aa23.44■■□□□ 1.34
CSNK1E-206ENST00000413574 PRSS46E5RG02 174 aa23.43■■□□□ 1.34
CSNK1E-206ENST00000413574 GNG7O60262 68 aa23.43■■□□□ 1.34
CSNK1E-206ENST00000413574 PVALBP20472 110 aaPredicted RBP23.43■■□□□ 1.34
CSNK1E-206ENST00000413574 BCAP31P51572 246 aa23.43■■□□□ 1.34
CSNK1E-206ENST00000413574 SYNJ2BPP57105 145 aa23.43■■□□□ 1.34
CSNK1E-206ENST00000413574 KLF5Q13887 457 aaPredicted RBP23.43■■□□□ 1.34
CSNK1E-206ENST00000413574 OR8G2PQ6IF36 304 aa23.43■■□□□ 1.34
CSNK1E-206ENST00000413574 ZNF436Q9C0F3 470 aaPredicted RBP23.43■■□□□ 1.34
CSNK1E-206ENST00000413574 FAM24AA6NFZ4 105 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 PMS2P5A8MQ11 134 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 NPBWR1P48145 328 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 CAV2P51636 162 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 RND2P52198 227 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 WFDC9Q8NEX5 89 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 OR4X1Q8NH49 305 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 ACY3Q96HD9 319 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 ATP6V0BQ99437 205 aa23.42■■□□□ 1.34
CSNK1E-206ENST00000413574 ETFRF1Q6IPR1 90 aa23.41■■□□□ 1.34
CSNK1E-206ENST00000413574 MPC2O95563 127 aa23.41■■□□□ 1.34
CSNK1E-206ENST00000413574 SLC25A4P12235 298 aa23.41■■□□□ 1.34
CSNK1E-206ENST00000413574 Q6ZNX1 250 aa23.41■■□□□ 1.34
CSNK1E-206ENST00000413574 NPIPB3Q92617 1050 aa23.41■■□□□ 1.34
CSNK1E-206ENST00000413574 OVOL1O14753 267 aa23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 CLN5O75503 358 aa23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 RLN2P04090 185 aa23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 GPX4P36969 197 aaPredicted RBP23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 GAMTQ14353 236 aa23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 SPSB3Q6PJ21 355 aa23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 HAPLN4Q86UW8 402 aa23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 RNF126Q9BV68 326 aa23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 GAR1Q9NY12 217 aaKnown RBP23.4■■□□□ 1.34
CSNK1E-206ENST00000413574 NUPL2O15504 423 aaKnown RBP23.39■■□□□ 1.33
CSNK1E-206ENST00000413574 ARL16Q0P5N6 197 aa23.39■■□□□ 1.33
CSNK1E-206ENST00000413574 TMEM116Q8NCL8 245 aa23.39■■□□□ 1.33
CSNK1E-206ENST00000413574 ZNF414Q96IQ9 312 aa23.39■■□□□ 1.33
CSNK1E-206ENST00000413574 LYRM2Q9NU23 88 aaPredicted RBP23.39■■□□□ 1.33
CSNK1E-206ENST00000413574 NOTCH3Q9UM47 2321 aa23.39■■□□□ 1.33
CSNK1E-206ENST00000413574 MGAM2Q2M2H8 2515 aa23.38■■□□□ 1.33
CSNK1E-206ENST00000413574 IGLL1P15814 213 aa23.38■■□□□ 1.33
CSNK1E-206ENST00000413574 CHAC2Q8WUX2 184 aa23.38■■□□□ 1.33
CSNK1E-206ENST00000413574 IGSF23A1L1A6 192 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 ACOT7LQ6ZUV0 252 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 CACNG8Q8WXS5 425 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 E5RGE8 158 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 CST7O76096 145 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 UNQ9165/PRO28630Q6UXU0 137 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 GPHB5Q86YW7 130 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 C1QL4Q86Z23 238 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 SLC35E1Q96K37 410 aa23.37■■□□□ 1.33
CSNK1E-206ENST00000413574 TIGITQ495A1 244 aa23.36■■□□□ 1.33
CSNK1E-206ENST00000413574 IGHV3OR16-8A0A075B7F1 116 aa23.35■■□□□ 1.33
CSNK1E-206ENST00000413574 TRAV14DV4A0A0A6YYC5 116 aa23.35■■□□□ 1.33
CSNK1E-206ENST00000413574 ZNF320A2RRD8 509 aa23.35■■□□□ 1.33
CSNK1E-206ENST00000413574 GIPP09681 153 aaPredicted RBP23.35■■□□□ 1.33
CSNK1E-206ENST00000413574 Q5BKY6 102 aa23.35■■□□□ 1.33
CSNK1E-206ENST00000413574 TMEM252Q8N6L7 170 aa23.35■■□□□ 1.33
CSNK1E-206ENST00000413574 OR10P1Q8NGE3 313 aa23.35■■□□□ 1.33
CSNK1E-206ENST00000413574 MBD2Q9UBB5 411 aa23.35■■□□□ 1.33
CSNK1E-206ENST00000413574 IGKV1-17P01599 117 aa23.34■■□□□ 1.33
CSNK1E-206ENST00000413574 IGLC1P0CG04 106 aa23.34■■□□□ 1.33
CSNK1E-206ENST00000413574 OR10J1P30954 320 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms