RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 OR4X1Q8NH49 305 aa11.76□□□□□ -0.53
LSM5-207ENST00000410044 PINX1Q96BK5 328 aaKnown RBP11.76□□□□□ -0.53
LSM5-207ENST00000410044 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
LSM5-207ENST00000410044 SLC25A31Q9H0C2 315 aa11.76□□□□□ -0.53
LSM5-207ENST00000410044 GAR1Q9NY12 217 aaKnown RBP11.76□□□□□ -0.53
LSM5-207ENST00000410044 C21orf62Q9NYP8 219 aa11.76□□□□□ -0.53
LSM5-207ENST00000410044 IGSF23A1L1A6 192 aa11.75□□□□□ -0.53
LSM5-207ENST00000410044 DLK1P80370 383 aa11.75□□□□□ -0.53
LSM5-207ENST00000410044 ARL16Q0P5N6 197 aa11.75□□□□□ -0.53
LSM5-207ENST00000410044 C18orf65Q6ZTR6 163 aa11.75□□□□□ -0.53
LSM5-207ENST00000410044 GGACTQ9BVM4 153 aa11.75□□□□□ -0.53
LSM5-207ENST00000410044 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
LSM5-207ENST00000410044 IGHV3-11P01762 117 aa11.74□□□□□ -0.53
LSM5-207ENST00000410044 HSPB1P04792 205 aaKnown RBP11.74□□□□□ -0.53
LSM5-207ENST00000410044 CLEC3BP05452 202 aa11.74□□□□□ -0.53
LSM5-207ENST00000410044 S100A11P31949 105 aa11.74□□□□□ -0.53
LSM5-207ENST00000410044 NPBWR1P48145 328 aa11.74□□□□□ -0.53
LSM5-207ENST00000410044 BAXQ07812 192 aa11.74□□□□□ -0.53
LSM5-207ENST00000410044 GAMTQ14353 236 aa11.74□□□□□ -0.53
LSM5-207ENST00000410044 HIST2H2BDQ6DRA6 164 aa11.74□□□□□ -0.53
LSM5-207ENST00000410044 KLHL30-AS1Q8NEE0 82 aa11.74□□□□□ -0.53
LSM5-207ENST00000410044 MRPL36Q9P0J6 103 aaKnown RBP11.74□□□□□ -0.53
LSM5-207ENST00000410044 PAIP2BQ9ULR5 123 aaKnown RBP11.74□□□□□ -0.53
LSM5-207ENST00000410044 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 IGHV3-21A0A0B4J1V1 117 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 CLN5O75503 358 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 CST7O76096 145 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 RPL12P30050 165 aaKnown RBP11.73□□□□□ -0.53
LSM5-207ENST00000410044 EWSR1Q01844 656 aaKnown RBP eCLIP11.73□□□□□ -0.53
LSM5-207ENST00000410044 NHLH2Q02577 135 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 ATP6V1FQ16864 119 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 KHDC1LQ5JSQ8 128 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 SPSB3Q6PJ21 355 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 CLEC19AQ6UXS0 136 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 SLC16A13Q7RTY0 426 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 AKAP14Q86UN6 197 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 STX12Q86Y82 276 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 SPATA3Q8NHX4 192 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 DCUN1D4Q92564 292 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 BSCL2Q96G97 398 aaPredicted RBP11.73□□□□□ -0.53
LSM5-207ENST00000410044 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 NEURL2Q9BR09 285 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 S4R3C0 116 aa11.73□□□□□ -0.53
LSM5-207ENST00000410044 HMSDA8MTL9 139 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 NUDT19A8MXV4 375 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 IGHV3-48P01763 117 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 IGHV3-23P01764 117 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 CTSGP08311 255 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 MYCNOSP40205 109 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 HBG1P69891 147 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 HBG2P69892 147 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 FHL3Q13643 280 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 OR8G2PQ6IF36 304 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 ACSM6Q6P461 480 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 C8orf86Q6ZUL3 223 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 OR5B12Q96R08 314 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 TNFSF18Q9UNG2 199 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 HSPB11Q9Y547 144 aa11.72□□□□□ -0.53
LSM5-207ENST00000410044 A0A1W2PRX2 142 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 ANKRD34BA5PLL1 514 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 SMLR1H3BR10 107 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 TGOLN2O43493 480 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 TRBV12-3P01733 135 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 SLC38A11Q08AI6 406 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 NSUN5P1Q3KNT7 163 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 Q56UQ5 140 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 ACOT7LQ6ZUV0 252 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 TMEM144Q7Z5S9 345 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 THAP8Q8NA92 274 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 OR11H1Q8NG94 326 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 OR11H4Q8NGC9 324 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 OR1N2Q8NGR9 330 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 NPIPB3Q92617 1050 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 SLC35E1Q96K37 410 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 NPVFQ9HCQ7 196 aa11.71□□□□□ -0.53
LSM5-207ENST00000410044 TENM1Q9UKZ4 2725 aa11.71□□□□□ -0.54
LSM5-207ENST00000410044 IGHV4OR15-8A0A075B7B6 117 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 A0A087WW49 117 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 LINC01619G3V211 115 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 CCL24O00175 119 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 BMPR1BO00238 502 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 GNG7O60262 68 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 GGCTO75223 188 aaKnown RBP11.7□□□□□ -0.54
LSM5-207ENST00000410044 C1QBP02746 253 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 GPR183P32249 361 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 ADMP35318 185 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 RND2P52198 227 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 ZNF616Q08AN1 781 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 GPHB5Q86YW7 130 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 TMEM217Q8N7C4 229 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 OR4F4Q96R69 305 aa11.7□□□□□ -0.54
LSM5-207ENST00000410044 IGKV1D-37A0A075B6S9 117 aa11.69□□□□□ -0.54
LSM5-207ENST00000410044 FXYD6-FXYD2A0A087WZ82 144 aa11.69□□□□□ -0.54
LSM5-207ENST00000410044 RNF222A6NCQ9 220 aa11.69□□□□□ -0.54
LSM5-207ENST00000410044 OR2T8A6NH00 312 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms