RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
CBX3-203ENST00000409747 OPRK1P41145 380 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 SP6Q3SY56 376 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 CEMP1Q6PRD7 247 aaPredicted RBP10.87□□□□□ -0.67
CBX3-203ENST00000409747 GBGT1Q8N5D6 347 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 MARCH1Q8TCQ1 289 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 ST8SIA2Q92186 375 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 A0A1W2PS18 150 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 TMEM50AO95807 157 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 ETV6P41212 452 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 RPL5P46777 297 aaKnown RBP10.87□□□□□ -0.67
CBX3-203ENST00000409747 RPL11P62913 178 aaKnown RBP10.87□□□□□ -0.67
CBX3-203ENST00000409747 SURF2Q15527 256 aaPredicted RBP10.87□□□□□ -0.67
CBX3-203ENST00000409747 GPR141Q7Z602 305 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 NARS2Q96I59 477 aaKnown RBP10.87□□□□□ -0.67
CBX3-203ENST00000409747 MRPS26Q9BYN8 205 aaKnown RBP10.87□□□□□ -0.67
CBX3-203ENST00000409747 TMEM222Q9H0R3 208 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 MS4A6AQ9H2W1 248 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 RPS10-NUDT3A0A1W2PQS6 291 aa10.86□□□□□ -0.67
CBX3-203ENST00000409747 DISC1C4P0D8 188 aa10.86□□□□□ -0.67
CBX3-203ENST00000409747 CLN5O75503 358 aa10.86□□□□□ -0.67
CBX3-203ENST00000409747 SPCS3P61009 180 aa10.86□□□□□ -0.67
CBX3-203ENST00000409747 EWSR1Q01844 656 aaKnown RBP eCLIP10.86□□□□□ -0.67
CBX3-203ENST00000409747 OR4X1Q8NH49 305 aa10.86□□□□□ -0.67
CBX3-203ENST00000409747 OR52E5Q8NH55 327 aa10.86□□□□□ -0.67
CBX3-203ENST00000409747 METTL26Q96S19 204 aa10.86□□□□□ -0.67
CBX3-203ENST00000409747 RABL2AQ9UBK7 228 aaPredicted RBP10.86□□□□□ -0.67
CBX3-203ENST00000409747 RABL2BQ9UNT1 228 aa10.86□□□□□ -0.67
CBX3-203ENST00000409747 TRAV30A0A087WSZ9 112 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 TEX13DA0A0J9YY54 714 aaPredicted RBP10.85□□□□□ -0.67
CBX3-203ENST00000409747 CDS2O95674 445 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 LY6G6CO95867 125 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 OR5AC1P0C628 307 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 NPPCP23582 126 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 HTR2BP41595 481 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 DHODHQ02127 395 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 ZNF124Q15973 351 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 BSXQ3C1V8 233 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 AARDQ4LEZ3 155 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 SMIM4Q8WVI0 70 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 RBPMSQ93062 196 aaKnown RBP10.85□□□□□ -0.67
CBX3-203ENST00000409747 RARRES2Q99969 163 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 MIXL1Q9H2W2 232 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.85□□□□□ -0.67
CBX3-203ENST00000409747 CACFD1Q9UGQ2 172 aa10.85□□□□□ -0.67
CBX3-203ENST00000409747 A0A0G2JRQ6 117 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 A0A1B0GU03 582 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
CBX3-203ENST00000409747 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 IGHV3-66A0A0C4DH42 116 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 CA1P00915 261 aaPredicted RBP10.84□□□□□ -0.67
CBX3-203ENST00000409747 AKAIN1P0CW23 69 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 TMEM230Q96A57 120 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 GRAMD2BQ96HH9 432 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 PRRT1Q99946 306 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 C11orf68Q9H3H3 251 aaKnown RBP10.84□□□□□ -0.67
CBX3-203ENST00000409747 FNDC4Q9H6D8 234 aaPredicted RBP10.84□□□□□ -0.67
CBX3-203ENST00000409747 RABAC1Q9UI14 185 aa10.84□□□□□ -0.67
CBX3-203ENST00000409747 CTDSPLO15194 276 aa10.83□□□□□ -0.68
CBX3-203ENST00000409747 EIF2B2P49770 351 aaKnown RBP10.83□□□□□ -0.68
CBX3-203ENST00000409747 DEFB131AP59861 70 aa10.83□□□□□ -0.68
CBX3-203ENST00000409747 IL18Q14116 193 aa10.83□□□□□ -0.68
CBX3-203ENST00000409747 FAAP20Q6NZ36 180 aa10.83□□□□□ -0.68
CBX3-203ENST00000409747 GLYATL2Q8WU03 294 aa10.83□□□□□ -0.68
CBX3-203ENST00000409747 RTBDNQ9BSG5 229 aaPredicted RBP10.83□□□□□ -0.68
CBX3-203ENST00000409747 MFFQ9GZY8 342 aa10.83□□□□□ -0.68
CBX3-203ENST00000409747 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
CBX3-203ENST00000409747 CRYM-AS1A6NIL9 109 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 CTDSP2O14595 271 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 SLC25A4P12235 298 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 CRYBB3P26998 211 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 ALDH3B2P48448 385 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 TMEM187Q14656 261 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 TMEM268Q5VZI3 342 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 Q6ZRM9 215 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 STHQ8IWL8 128 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 LILRB2Q8N423 598 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 RNASEH2CQ8TDP1 164 aaKnown RBP10.82□□□□□ -0.68
CBX3-203ENST00000409747 RAB2BQ8WUD1 216 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 PHLDA1Q8WV24 401 aaPredicted RBP10.82□□□□□ -0.68
CBX3-203ENST00000409747 CACNG5Q9UF02 275 aa10.82□□□□□ -0.68
CBX3-203ENST00000409747 P2RY1P47900 373 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 SPCS2Q15005 226 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 C2orf83Q53S99 150 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 TMEM41BQ5BJD5 291 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 LEMD1Q68G75 181 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 NOXA1Q86UR1 476 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 SELENOHQ8IZQ5 122 aaKnown RBP10.81□□□□□ -0.68
CBX3-203ENST00000409747 SLC24A4Q8NFF2 622 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 OR4C16Q8NGL9 310 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 OR1S2Q8NGQ3 325 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 DIRAS2Q96HU8 199 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 BCL7BQ9BQE9 202 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 CCDC59Q9P031 241 aaKnown RBP10.81□□□□□ -0.68
CBX3-203ENST00000409747 MRPL36Q9P0J6 103 aaKnown RBP10.81□□□□□ -0.68
CBX3-203ENST00000409747 CEBPZOSA8MTT3 80 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 IGKV1-17P01599 117 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms