RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ACTL10Q5JWF8 245 aa6□□□□□ -1.45
UPF2-203ENST00000397053 GATD1Q8NB37 220 aa6□□□□□ -1.45
UPF2-203ENST00000397053 MBD3L1Q8WWY6 194 aa6□□□□□ -1.45
UPF2-203ENST00000397053 MPDZO75970 2070 aa6□□□□□ -1.45
UPF2-203ENST00000397053 DPRXA6NFQ7 191 aa6□□□□□ -1.45
UPF2-203ENST00000397053 C15orf32Q32M92 178 aa6□□□□□ -1.45
UPF2-203ENST00000397053 ZNF876PQ49A33 203 aa6□□□□□ -1.45
UPF2-203ENST00000397053 MRPL14Q6P1L8 145 aaKnown RBP6□□□□□ -1.45
UPF2-203ENST00000397053 C8orf82Q6P1X6 216 aaPredicted RBP6□□□□□ -1.45
UPF2-203ENST00000397053 SIGLEC15Q6ZMC9 328 aa6□□□□□ -1.45
UPF2-203ENST00000397053 SLC25A38Q96DW6 304 aa6□□□□□ -1.45
UPF2-203ENST00000397053 TRAV2A0A0B4J234 112 aa6□□□□□ -1.45
UPF2-203ENST00000397053 SFTA2Q6UW10 78 aa6□□□□□ -1.45
UPF2-203ENST00000397053 BMPERQ8N8U9 685 aa6□□□□□ -1.45
UPF2-203ENST00000397053 TNFRSF14Q92956 283 aa6□□□□□ -1.45
UPF2-203ENST00000397053 C1orf159Q96HA4 380 aa6□□□□□ -1.45
UPF2-203ENST00000397053 WFIKKN1Q96NZ8 548 aa6□□□□□ -1.45
UPF2-203ENST00000397053 C1QTNF5Q9BXJ0 243 aa6□□□□□ -1.45
UPF2-203ENST00000397053 CUL9Q8IWT3 2517 aa6□□□□□ -1.45
UPF2-203ENST00000397053 TRIP12Q14669 1992 aaPredicted RBP6□□□□□ -1.45
UPF2-203ENST00000397053 SLC17A3O00476 420 aa6□□□□□ -1.45
UPF2-203ENST00000397053 VENTXO95231 258 aa6□□□□□ -1.45
UPF2-203ENST00000397053 GATA4P43694 442 aa6□□□□□ -1.45
UPF2-203ENST00000397053 ST6GALNAC3Q8NDV1 305 aa6□□□□□ -1.45
UPF2-203ENST00000397053 A0A0G2JK05 382 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 C15orf61A6NNL5 157 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 RNF223E7ERA6 249 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 YPEL1O60688 119 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 IL18BPO95998 194 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 TIMP3P35625 211 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 PRCDQ00LT1 54 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 SRSF1Q07955 248 aaKnown RBP eCLIP5.99□□□□□ -1.45
UPF2-203ENST00000397053 ORMDL2Q53FV1 153 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 MIR17HGQ75NE6 70 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 NR2C2APQ86WQ0 139 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 FAM110DQ8TAY7 271 aaPredicted RBP5.99□□□□□ -1.45
UPF2-203ENST00000397053 YPEL2Q96QA6 119 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 PPP1R3EQ9H7J1 279 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 F5H768 121 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 TNFSF13O75888 250 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 TOMM40O96008 361 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 Q71RC1 249 aaPredicted RBP5.99□□□□□ -1.45
UPF2-203ENST00000397053 PEF1Q9UBV8 284 aaKnown RBP5.99□□□□□ -1.45
UPF2-203ENST00000397053 ELF5Q9UKW6 265 aaPredicted RBP5.99□□□□□ -1.45
UPF2-203ENST00000397053 C5P01031 1676 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 IGHV3-73A0A0B4J1V6 119 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 SRRM4A7MD48 611 aaKnown RBP5.99□□□□□ -1.45
UPF2-203ENST00000397053 CD59P13987 128 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 CCL1P22362 96 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 UCP1P25874 307 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 MTURNQ8N3F0 131 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 LINC01356Q8N9X3 169 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 TMEM126AQ9H061 195 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 PSG8Q9UQ74 426 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 MRPS18CQ9Y3D5 142 aaKnown RBP5.99□□□□□ -1.45
UPF2-203ENST00000397053 HIVEP2P31629 2446 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 IGHV1-46P01743 117 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 SEC11AP67812 179 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 C21orf62-AS1Q17RA5 79 aa5.99□□□□□ -1.45
UPF2-203ENST00000397053 TRAV8-2A0A0B4J237 113 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 OOSP1A8MZH6 123 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 C4orf51C9J302 202 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 SIGLEC5O15389 551 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 PIN1P1O15428 100 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 GCM2O75603 506 aaPredicted RBP5.98□□□□□ -1.45
UPF2-203ENST00000397053 IGHMP01871 453 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 PPBPP02775 128 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 NAT1P18440 290 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 TFF3Q07654 80 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 LINC01590Q5TEZ4 76 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 NPDC1Q9NQX5 325 aaPredicted RBP5.98□□□□□ -1.45
UPF2-203ENST00000397053 NPIPB5A8MRT5 1133 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 Q5PR19 223 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 MINOS1Q5TGZ0 78 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 VMO1Q7Z5L0 202 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 DLX4Q92988 240 aaPredicted RBP5.98□□□□□ -1.45
UPF2-203ENST00000397053 ZNF837Q96EG3 531 aaPredicted RBP5.98□□□□□ -1.45
UPF2-203ENST00000397053 MINOS1-NBL1R4GNA1 71 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 HIGD1CA8MV81 97 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 IGHV4-39P01824 125 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 SPSB3Q6PJ21 355 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 WBP1Q96G27 269 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 IGHV1-18A0A0C4DH31 117 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 SCO2A0A1W2PP80 73 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 DANCRP0C864 163 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 CXCL2P19875 107 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 GZMMP51124 257 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 DAD1P61803 113 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 COQ2Q96H96 371 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 IL36BQ9NZH7 164 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 FANCMQ8IYD8 2048 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 SLC25A2Q9BXI2 301 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 ZMAT4Q9H898 229 aa5.98□□□□□ -1.45
UPF2-203ENST00000397053 ZNF561-AS1K7EIQ3 104 aa5.97□□□□□ -1.45
UPF2-203ENST00000397053 GREM1O60565 184 aa5.97□□□□□ -1.45
UPF2-203ENST00000397053 FCN3O75636 299 aa5.97□□□□□ -1.45
UPF2-203ENST00000397053 MORN2Q502X0 79 aa5.97□□□□□ -1.45
UPF2-203ENST00000397053 PUSL1Q8N0Z8 303 aaKnown RBP5.97□□□□□ -1.45
UPF2-203ENST00000397053 LAMB4A4D0S4 1761 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms