RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 IMP4Q96G21 291 aaKnown RBP-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 CYTH2Q99418 400 aa-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 DERL1Q9BUN8 251 aa-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 HDHD2Q9H0R4 259 aa-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 LPAR5Q9H1C0 372 aa-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 OR51V1Q9H2C8 321 aa-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 RBMX2Q9Y388 322 aaKnown RBP-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 V9GYY5 206 aaPredicted RBP-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 PKDREJQ9NTG1 2253 aa-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 MYH10P35580 1976 aa-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 PTPRFP10586 1907 aa-0.52□□□□□ -2.49
SNORD28-201ENST00000384706 KDM6AO15550 1401 aaPredicted RBP-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 RTL1A6NKG5 1358 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 STAB2Q8WWQ8 2551 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 MYH7BA7E2Y1 1941 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 GOLGA8QA0A0J9YX86 632 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 A0A0J9YY10 115 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 TEX50A0A1B0GTY4 177 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 A0A1B0GX78 115 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 GSTTP1A0A1W2PQM5 241 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 TCRBV4S1A1TA0A5B7 111 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 PRORSD1PA6NEY8 169 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 OR4C45A6NMZ5 311 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 NEMFO60524 1076 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 KCNE1P15382 129 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 FXYD4P59646 89 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 RPL37P61927 97 aaKnown RBP-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 TNFAIP6P98066 277 aaPredicted RBP-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 IFITM2Q01629 132 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 FABP9Q0Z7S8 132 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 VAMP3Q15836 100 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 ESRGQ1W209 222 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 SPINK13Q1W4C9 94 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 DNAL1Q4LDG9 190 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 BRMS1LQ5PSV4 323 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 GLT8D1Q68CQ7 371 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 C2orf82Q6UX34 121 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 BLIDQ8IZY5 108 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 SIGLECL1Q8N7X8 197 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 OR52L1Q8NGH7 329 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 OR13D1Q8NGV5 346 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 STOML3Q8TAV4 291 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 AGR3Q8TD06 166 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 SLC37A2Q8TED4 501 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 ROPN1LQ96C74 230 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 TP53RKQ96S44 253 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 LYSMD1Q96S90 227 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 HES4Q9HCC6 221 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 C14orf132Q9NPU4 83 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 FKBP14Q9NWM8 211 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 ENPP5Q9UJA9 477 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 HSPB8Q9UJY1 196 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 OR52A1Q9UKL2 312 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 PXMP4Q9Y6I8 212 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 KIF13BQ9NQT8 1826 aa-0.53□□□□□ -2.49
SNORD28-201ENST00000384706 SPTBN2O15020 2390 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 KIF27Q86VH2 1401 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 RIMS2Q9UQ26 1411 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 LRPPRCP42704 1394 aaKnown RBP-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 KIF15Q9NS87 1388 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 ECM29Q5VYK3 1845 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 TRBV20OR9-2A0A075B6H5 130 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 CYB5BO43169 146 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 STX10O60499 249 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HMMRO75330 724 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 ATP6V1G2O95670 118 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 DHFRP00374 187 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 COX7CP15954 63 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 PTNP21246 168 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 CCL1P22362 96 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST1H2BOP23527 126 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 CASP1P29466 404 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST1H2BBP33778 126 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST1H2BDP58876 126 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 ROMO1P60602 79 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST1H2BCP62807 126 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 CCL20P78556 96 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 COX6A2Q02221 97 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 STX3Q13277 289 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 GRK1Q15835 563 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST2H2BEQ16778 126 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 C4orf26Q17RF5 130 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HLA-DRB5Q30154 266 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 OCIAD2Q56VL3 154 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 C1orf194Q5T5A4 169 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 FAM78BQ5VT40 261 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 RPL22L1Q6P5R6 122 aaKnown RBP-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 CASC2Q6XLA1 102 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 ZNF833PQ6ZTB9 187 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST2H3AQ71DI3 136 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST3H2BBQ8N257 126 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 ATP6V1C2Q8NEY4 427 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 TERB2Q8NHR7 220 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 RNASEH2CQ8TDP1 164 aaKnown RBP-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 EEF1AKMT1Q8WVE0 214 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST1H2BHQ93079 126 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST1H2BNQ99877 126 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 HIST1H2BMQ99879 126 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms