RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 RNASE4P34096 147 aaKnown RBP12.93□□□□□ -0.34
COL5A1-201ENST00000371817 CACNG8Q8WXS5 425 aa12.93□□□□□ -0.34
COL5A1-201ENST00000371817 IGKV1D-42A0A075B6H8 117 aa12.93□□□□□ -0.34
COL5A1-201ENST00000371817 MAGEA5P43359 124 aa12.93□□□□□ -0.34
COL5A1-201ENST00000371817 AZU1P20160 251 aa12.93□□□□□ -0.34
COL5A1-201ENST00000371817 TSSC4Q9Y5U2 329 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-201ENST00000371817 USF3Q68DE3 2245 aa12.93□□□□□ -0.34
COL5A1-201ENST00000371817 IGHV3-64A0A075B6Q5 118 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 PMS2CLQ68D20 193 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 NDUFC2O95298 119 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 A0A1W2PQF6 199 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 FABP5P3A8MUU1 101 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 TEX38Q6PEX7 206 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 ZAR1Q86SH2 424 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 MALRD1Q5VYJ5 2156 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 POU2AF1Q16633 256 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 JPT2Q9H910 190 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 TRAV8-3A0A0A6YYJ7 113 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 COX14Q96I36 57 aa12.92□□□□□ -0.34
COL5A1-201ENST00000371817 ZNF703Q9H7S9 590 aaPredicted RBP12.91□□□□□ -0.34
COL5A1-201ENST00000371817 SYS1-DBNDD2H3BUS1 97 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 PIN1P1O15428 100 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 KLK10O43240 276 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 OTORQ9NRC9 128 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 NCR2O95944 276 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 INAFM2P0DMQ5 153 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 CD28P10747 220 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 UCP1P25874 307 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 FOXL2P58012 376 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
COL5A1-201ENST00000371817 RTBDNQ9BSG5 229 aaPredicted RBP12.91□□□□□ -0.34
COL5A1-201ENST00000371817 OCC1Q8TAD7 63 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 OBSL1O75147 1896 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 GAGE12HA6NDE8 117 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 ZNHIT1O43257 154 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 FGF16O43320 207 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 SPEM2Q0P670 501 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 MIR17HGQ75NE6 70 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 SHISA5Q8N114 240 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 PPDPFLQ8WWR9 84 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 ABHD17AQ96GS6 310 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 TMEM14DPA8MWL7 114 aa12.91□□□□□ -0.34
COL5A1-201ENST00000371817 NPC2P61916 151 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 EGR4Q05215 589 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 ZNF385AQ96PM9 386 aaKnown RBP12.9□□□□□ -0.34
COL5A1-201ENST00000371817 EML5Q05BV3 1969 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 NPSP0C0P6 89 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 CCL8P80075 99 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 PRSS53Q2L4Q9 553 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 CFHR5Q9BXR6 569 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 IFI27L2Q9H2X8 130 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 LHX9Q9NQ69 397 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 FRMPD3Q5JV73 1810 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 ZXDCQ2QGD7 858 aaPredicted RBP12.9□□□□□ -0.34
COL5A1-201ENST00000371817 RPRMLQ8N4K4 120 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.34
COL5A1-201ENST00000371817 ZNF525Q8N782 197 aa12.9□□□□□ -0.35
COL5A1-201ENST00000371817 ZNF114Q8NC26 417 aa12.9□□□□□ -0.35
COL5A1-201ENST00000371817 GPBAR1Q8TDU6 330 aa12.9□□□□□ -0.35
COL5A1-201ENST00000371817 PRR32B1ATL7 298 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 K7EP13 123 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 LINC01465Q8N7H1 131 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 FAM60AQ9NP50 221 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 CD69Q07108 199 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 BOD1L2Q8IYS8 172 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 SELLP14151 372 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 LCN12Q6JVE5 192 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 SORL1Q92673 2214 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 LEPROTO15243 131 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 NDUFA2O43678 99 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 LINC00158P58513 81 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 IGHV1OR21-1A0A087WYE8 117 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 LEAP2Q969E1 77 aa12.89□□□□□ -0.35
COL5A1-201ENST00000371817 SRFP11831 508 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 SUMO4Q6EEV6 95 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 EREGO14944 169 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 C3AR1Q16581 482 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 PPP1R27Q86WC6 154 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 A0A1B0GW64 132 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 GAGE5Q13069 117 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 GAGE6Q13070 117 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 TMEM196Q5HYL7 178 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 SLC25A48Q6ZT89 311 aaKnown RBP12.88□□□□□ -0.35
COL5A1-201ENST00000371817 AMELYQ99218 206 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 C9orf118A6NHY6 69 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 PLEKHB2Q96CS7 222 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 GAGE12JA6NER3 117 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 GAGE7O76087 117 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 CCL3P10147 92 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 GAGE4Q13068 117 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 CLEC2AQ6UVW9 174 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 C9orf40Q8IXQ3 194 aa12.88□□□□□ -0.35
COL5A1-201ENST00000371817 UBR3Q6ZT12 1888 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms