RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PRCDQ00LT1 54 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 SBF2Q86WG5 1849 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 RBMY1BA6NDE4 496 aaKnown RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 RBMY1EA6NEQ0 496 aaKnown RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 RBMY1DP0C7P1 496 aaKnown RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 RBMY1A1P0DJD3 496 aaKnown RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 RBMY1CP0DJD4 496 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 DUTP33316 252 aaKnown RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 RNASE7Q9H1E1 156 aaKnown RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 VCX2Q9H322 139 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 ANKRD36A6QL64 1941 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 TNFRSF14Q92956 283 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 PGPEP1Q9NXJ5 209 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 A0A087WV48 116 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 LDLRAD4O15165 306 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 NAT1P18440 290 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 IFI27P40305 119 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 FOXG1P55316 489 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 VMO1Q7Z5L0 202 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 PLSCR4Q9NRQ2 329 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 IL18BPO95998 194 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 GTF3AQ92664 365 aaKnown RBP14.96□□□□□ -0.01
COL18A1-202ENST00000355480 EPDR1Q9UM22 224 aa14.96□□□□□ -0.01
COL18A1-202ENST00000355480 INTS1Q8N201 2190 aaKnown RBP14.96□□□□□ -0.02
COL18A1-202ENST00000355480 C14orf144Q96I85 54 aa14.96□□□□□ -0.02
COL18A1-202ENST00000355480 LINC00469Q8N7U9 141 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 RNF222A6NCQ9 220 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 TMEM219Q86XT9 240 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 TET1Q8NFU7 2136 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 TAF1LQ8IZX4 1826 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 IGHV2-26A0A0B4J1V2 119 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 CRPP02741 224 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 CACNA1GO43497 2377 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 BRCA1P38398 1863 aaKnown RBP14.95□□□□□ -0.02
COL18A1-202ENST00000355480 SAP30O75446 220 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 LYPD3O95274 346 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 PSMG4Q5JS54 123 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 ZNF324BQ6AW86 544 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-202ENST00000355480 ST6GALNAC6Q969X2 333 aa14.95□□□□□ -0.02
COL18A1-202ENST00000355480 SLC25A28Q96A46 364 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 GGNQ86UU5 652 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 FAM19A2Q8N3H0 131 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 PSG8Q9UQ74 426 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 APOMO95445 188 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 PPIFP30405 207 aaKnown RBP14.94□□□□□ -0.02
COL18A1-202ENST00000355480 CTAG1AP78358 180 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 GFI1BQ5VTD9 330 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 SELENOKQ9Y6D0 94 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 TRGV11A0A075B6L2 103 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 CCL20P78556 96 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 SIGLEC15Q6ZMC9 328 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 FBLN5Q9UBX5 448 aa14.94□□□□□ -0.02
COL18A1-202ENST00000355480 EP300Q09472 2414 aaPredicted RBP14.93□□□□□ -0.02
COL18A1-202ENST00000355480 CRYGSP22914 178 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 CRIPAKQ8N1N5 446 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 OR10W1Q8NGF6 305 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 TRAV9-1A0A075B6T8 112 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 PRR32B1ATL7 298 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 MLNRO43193 412 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 ALPK2Q86TB3 2170 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 KLRD1Q13241 179 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 C20orf204Q6ZNR8 217 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 VGLL1Q99990 258 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 CEP250Q9BV73 2442 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 SELLP14151 372 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 UNQ6494/PRO21346Q6UXR6 183 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 NUDT10Q8NFP7 164 aa14.93□□□□□ -0.02
COL18A1-202ENST00000355480 PEF1Q9UBV8 284 aaKnown RBP14.93□□□□□ -0.02
COL18A1-202ENST00000355480 CARHSP1Q9Y2V2 147 aaKnown RBP14.93□□□□□ -0.02
COL18A1-202ENST00000355480 SSBP4Q9BWG4 385 aaPredicted RBP14.92□□□□□ -0.02
COL18A1-202ENST00000355480 RPL23P62829 140 aaKnown RBP14.92□□□□□ -0.02
COL18A1-202ENST00000355480 ZNF415Q09FC8 603 aa14.92□□□□□ -0.02
COL18A1-202ENST00000355480 FAM89BQ8N5H3 189 aa14.92□□□□□ -0.02
COL18A1-202ENST00000355480 ST6GALNAC3Q8NDV1 305 aa14.92□□□□□ -0.02
COL18A1-202ENST00000355480 RPUSD1Q9UJJ7 312 aaKnown RBP14.92□□□□□ -0.02
COL18A1-202ENST00000355480 SRRM5B3KS81 715 aa14.92□□□□□ -0.02
COL18A1-202ENST00000355480 EFNA2O43921 213 aa14.92□□□□□ -0.02
COL18A1-202ENST00000355480 ZNF362Q5T0B9 420 aaPredicted RBP14.91□□□□□ -0.02
COL18A1-202ENST00000355480 NR2C2APQ86WQ0 139 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 ZNF257Q9Y2Q1 563 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 TMEM200BQ69YZ2 307 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 FAM166AQ6J272 317 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 WDR90Q96KV7 1748 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 B4DSR2 109 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 DTX2Q86UW9 622 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 PAQR4Q8N4S7 273 aaPredicted RBP14.91□□□□□ -0.02
COL18A1-202ENST00000355480 OVOL1O14753 267 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 KIR3DL3Q8N743 410 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 CHCHD5Q9BSY4 110 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 AKAP6Q13023 2319 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 IGHV1-8P0DP01 117 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 PATJQ8NI35 1801 aa14.91□□□□□ -0.02
COL18A1-202ENST00000355480 A0A0A6YYD4 124 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 C15orf32Q32M92 178 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 DMRT1Q9Y5R6 373 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 C1QTNF9P0C862 333 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 RNF126Q9BV68 326 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 DPH3P1Q9H4G8 78 aa14.9□□□□□ -0.02
COL18A1-202ENST00000355480 SEPSECSQ9HD40 501 aaKnown RBP14.9□□□□□ -0.02
COL18A1-202ENST00000355480 A0A1W2PRE2 83 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms