RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 STRAPQ9Y3F4 350 aaKnown RBP17.01■□□□□ 0.31
SHMT1-203ENST00000354098 LY86O95711 162 aa17.01■□□□□ 0.31
SHMT1-203ENST00000354098 MFAP4P55083 255 aa17.01■□□□□ 0.31
SHMT1-203ENST00000354098 RPP30P78346 268 aaKnown RBP17.01■□□□□ 0.31
SHMT1-203ENST00000354098 CYCSP99999 105 aaKnown RBP17.01■□□□□ 0.31
SHMT1-203ENST00000354098 ACSM6Q6P461 480 aa17.01■□□□□ 0.31
SHMT1-203ENST00000354098 DCUN1D4Q92564 292 aa17.01■□□□□ 0.31
SHMT1-203ENST00000354098 OR2C1O95371 312 aa17■□□□□ 0.31
SHMT1-203ENST00000354098 RRAS2P62070 204 aaPredicted RBP17■□□□□ 0.31
SHMT1-203ENST00000354098 RAB11AP62491 216 aa17■□□□□ 0.31
SHMT1-203ENST00000354098 FAM209BQ5JX69 171 aa17■□□□□ 0.31
SHMT1-203ENST00000354098 CHRDL1Q9BU40 450 aa17■□□□□ 0.31
SHMT1-203ENST00000354098 L7N2F9 121 aa16.99■□□□□ 0.31
SHMT1-203ENST00000354098 TGOLN2O43493 480 aa16.99■□□□□ 0.31
SHMT1-203ENST00000354098 ZP3P21754 424 aa16.99■□□□□ 0.31
SHMT1-203ENST00000354098 TAS2R30P59541 319 aa16.99■□□□□ 0.31
SHMT1-203ENST00000354098 VAMP2P63027 116 aa16.99■□□□□ 0.31
SHMT1-203ENST00000354098 RPEL1Q2QD12 228 aa16.99■□□□□ 0.31
SHMT1-203ENST00000354098 WFDC9Q8NEX5 89 aa16.99■□□□□ 0.31
SHMT1-203ENST00000354098 PPP1R1CQ8WVI7 109 aa16.99■□□□□ 0.31
SHMT1-203ENST00000354098 IGHV3-35A0A0C4DH35 117 aa16.98■□□□□ 0.31
SHMT1-203ENST00000354098 TSC22D2O75157 780 aa16.98■□□□□ 0.31
SHMT1-203ENST00000354098 GGCTO75223 188 aaKnown RBP16.98■□□□□ 0.31
SHMT1-203ENST00000354098 CCNKO75909 580 aa16.98■□□□□ 0.31
SHMT1-203ENST00000354098 CTSGP08311 255 aa16.98■□□□□ 0.31
SHMT1-203ENST00000354098 FCGR2BP31994 310 aaPredicted RBP16.98■□□□□ 0.31
SHMT1-203ENST00000354098 ADMP35318 185 aa16.98■□□□□ 0.31
SHMT1-203ENST00000354098 CD69Q07108 199 aa16.98■□□□□ 0.31
SHMT1-203ENST00000354098 KLF5Q13887 457 aaPredicted RBP16.98■□□□□ 0.31
SHMT1-203ENST00000354098 PRSS54Q6PEW0 395 aa16.98■□□□□ 0.31
SHMT1-203ENST00000354098 TXN2Q99757 166 aa16.98■□□□□ 0.31
SHMT1-203ENST00000354098 RPS10-NUDT3A0A1W2PQS6 291 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 PRSS46E5RG02 174 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 H0YIZ8 118 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 DEDDO75618 318 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 CD33P20138 364 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 TMEM14EPQ6UXP3 125 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 BSCL2Q96G97 398 aaPredicted RBP16.97■□□□□ 0.31
SHMT1-203ENST00000354098 ATP6V0BQ99437 205 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 PMS2P5A8MQ11 134 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 GNG7O60262 68 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 METTL15P1P0C7V9 234 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 SYNJ2BPP57105 145 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 SLC16A13Q7RTY0 426 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 OR4X1Q8NH49 305 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 OR5AC2Q9NZP5 309 aa16.97■□□□□ 0.31
SHMT1-203ENST00000354098 FAM24AA6NFZ4 105 aa16.96■□□□□ 0.31
SHMT1-203ENST00000354098 PVALBP20472 110 aaPredicted RBP16.96■□□□□ 0.31
SHMT1-203ENST00000354098 NPBWR1P48145 328 aa16.96■□□□□ 0.31
SHMT1-203ENST00000354098 BCAP31P51572 246 aa16.96■□□□□ 0.31
SHMT1-203ENST00000354098 RND2P52198 227 aa16.96■□□□□ 0.31
SHMT1-203ENST00000354098 OR8G2PQ6IF36 304 aa16.96■□□□□ 0.31
SHMT1-203ENST00000354098 ETFRF1Q6IPR1 90 aa16.96■□□□□ 0.31
SHMT1-203ENST00000354098 ZNF436Q9C0F3 470 aaPredicted RBP16.96■□□□□ 0.31
SHMT1-203ENST00000354098 SLC25A4P12235 298 aa16.95■□□□□ 0.3
SHMT1-203ENST00000354098 GPX4P36969 197 aaPredicted RBP16.95■□□□□ 0.3
SHMT1-203ENST00000354098 CAV2P51636 162 aa16.95■□□□□ 0.3
SHMT1-203ENST00000354098 NPIPB3Q92617 1050 aa16.95■□□□□ 0.3
SHMT1-203ENST00000354098 ACY3Q96HD9 319 aa16.95■□□□□ 0.3
SHMT1-203ENST00000354098 ZNF414Q96IQ9 312 aa16.95■□□□□ 0.3
SHMT1-203ENST00000354098 CMYA5Q8N3K9 4069 aa16.95■□□□□ 0.3
SHMT1-203ENST00000354098 OVOL1O14753 267 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 CLN5O75503 358 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 MPC2O95563 127 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 GAMTQ14353 236 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 SPSB3Q6PJ21 355 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 Q6ZNX1 250 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 TMEM116Q8NCL8 245 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 RNF126Q9BV68 326 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 GAR1Q9NY12 217 aaKnown RBP16.94■□□□□ 0.3
SHMT1-203ENST00000354098 NUPL2O15504 423 aaKnown RBP16.94■□□□□ 0.3
SHMT1-203ENST00000354098 RLN2P04090 185 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 IGLL1P15814 213 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 ARL16Q0P5N6 197 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 HAPLN4Q86UW8 402 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 GPHB5Q86YW7 130 aa16.94■□□□□ 0.3
SHMT1-203ENST00000354098 LYRM2Q9NU23 88 aaPredicted RBP16.94■□□□□ 0.3
SHMT1-203ENST00000354098 UNQ9165/PRO28630Q6UXU0 137 aa16.93■□□□□ 0.3
SHMT1-203ENST00000354098 C1QL4Q86Z23 238 aa16.93■□□□□ 0.3
SHMT1-203ENST00000354098 CACNG8Q8WXS5 425 aa16.93■□□□□ 0.3
SHMT1-203ENST00000354098 IGSF23A1L1A6 192 aa16.92■□□□□ 0.3
SHMT1-203ENST00000354098 CHAC2Q8WUX2 184 aa16.92■□□□□ 0.3
SHMT1-203ENST00000354098 E5RGE8 158 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 CST7O76096 145 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 TIGITQ495A1 244 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 ACOT7LQ6ZUV0 252 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 TMEM252Q8N6L7 170 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 SLC35E1Q96K37 410 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 IGHV3OR16-8A0A075B7F1 116 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 ZNF320A2RRD8 509 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 IGKV1-17P01599 117 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 GIPP09681 153 aaPredicted RBP16.91■□□□□ 0.3
SHMT1-203ENST00000354098 IGLC1P0CG04 106 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 FAM106AQ4KMX7 169 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 OXLD1Q5BKU9 147 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 Q5BKY6 102 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 OR10P1Q8NGE3 313 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 OR9G4Q8NGQ1 327 aa16.91■□□□□ 0.3
SHMT1-203ENST00000354098 MGAM2Q2M2H8 2515 aa16.9■□□□□ 0.3
SHMT1-203ENST00000354098 TRAV14DV4A0A0A6YYC5 116 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms