RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 KCNS1Q96KK3 526 aa6.43□□□□□ -1.38
TRIM2-201ENST00000338700 Q9UFV3 132 aa6.43□□□□□ -1.38
TRIM2-201ENST00000338700 PLXNA3P51805 1871 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 Q6AWC8 147 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 PSMB11A5LHX3 300 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 CMC4P56277 68 aaPredicted RBP6.42□□□□□ -1.38
TRIM2-201ENST00000338700 MIR17HGQ75NE6 70 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 SLC25A28Q96A46 364 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 MRAP2Q96G30 205 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 RPP21Q9H633 154 aaKnown RBP6.42□□□□□ -1.38
TRIM2-201ENST00000338700 SLC25A15Q9Y619 301 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 IGHV3OR16-8A0A075B7F1 116 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 PRELID3AQ96N28 172 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 MESP1Q9BRJ9 268 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 IGKV1-9A0A0C4DH69 117 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 B4DSR2 109 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 OR13C6PQ8NH95 151 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 PMCHL2Q9BQD1 86 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 RSPO3Q9BXY4 272 aaPredicted RBP6.42□□□□□ -1.38
TRIM2-201ENST00000338700 IL36BQ9NZH7 164 aa6.42□□□□□ -1.38
TRIM2-201ENST00000338700 LOC107984156A0A0G2JMH3 177 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 TFF1P04155 84 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 SRSF7Q16629 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRIM2-201ENST00000338700 KIAA1644Q3SXP7 199 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 NHLRC3Q5JS37 347 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 ARL17AQ8IVW1 177 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 ZNF525Q8N782 197 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 LRTM2Q8N967 370 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 RNF125Q96EQ8 232 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 ANK1P16157 1881 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 SCO2A0A1W2PP80 73 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 TMEM178BH3BS89 294 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 RNASE1P07998 156 aaKnown RBP6.41□□□□□ -1.38
TRIM2-201ENST00000338700 CD24P25063 80 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 MINOS1Q5TGZ0 78 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 ASCL2Q99929 193 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 ZNF257Q9Y2Q1 563 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 MINOS1-NBL1R4GNA1 71 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 IGHV2-26A0A0B4J1V2 119 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 TRAV41A0A0B4J266 112 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 MBD3L4A6NDZ8 208 aaPredicted RBP6.41□□□□□ -1.38
TRIM2-201ENST00000338700 MBD3L3A6NE82 208 aaPredicted RBP6.41□□□□□ -1.38
TRIM2-201ENST00000338700 MBD3L5A6NJ08 208 aaPredicted RBP6.41□□□□□ -1.38
TRIM2-201ENST00000338700 H3BRM9 83 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 EGR1P18146 543 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 ZNF324BQ6AW86 544 aaPredicted RBP6.41□□□□□ -1.38
TRIM2-201ENST00000338700 FER1L6-AS1Q8NA97 138 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 MBD3L2Q8NHZ7 208 aaPredicted RBP6.41□□□□□ -1.38
TRIM2-201ENST00000338700 IGKV1D-13A0A0B4J2D9 117 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 A0A1B0GUT8 65 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 OOSP1A8MZH6 123 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 EFNA2O43921 213 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 IGKV1-13P0DP09 117 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 PRCDQ00LT1 54 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 NABP1Q96AH0 204 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 JKAMPQ9P055 326 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 SCN8AQ9UQD0 1980 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 SRRM5B3KS81 715 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 ZP1P60852 638 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 FAM89BQ8N5H3 189 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 BMPERQ8N8U9 685 aa6.41□□□□□ -1.38
TRIM2-201ENST00000338700 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.38
TRIM2-201ENST00000338700 PAX8Q06710 450 aa6.4□□□□□ -1.38
TRIM2-201ENST00000338700 Q5BKY6 102 aa6.4□□□□□ -1.38
TRIM2-201ENST00000338700 SLC25A34Q6PIV7 304 aa6.4□□□□□ -1.38
TRIM2-201ENST00000338700 CLPSP04118 112 aa6.4□□□□□ -1.38
TRIM2-201ENST00000338700 CACNA1IQ9P0X4 2223 aa6.4□□□□□ -1.38
TRIM2-201ENST00000338700 ATP5LO75964 103 aa6.4□□□□□ -1.38
TRIM2-201ENST00000338700 TMEM200BQ69YZ2 307 aa6.4□□□□□ -1.38
TRIM2-201ENST00000338700 FABP5P3A8MUU1 101 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 SLC25A16P16260 332 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 GATA2P23769 480 aaPredicted RBP6.4□□□□□ -1.39
TRIM2-201ENST00000338700 TMEM170BQ5T4T1 132 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 TPTE2P1Q5T6R2 138 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 BIVMQ86UB2 503 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 TMEM183AQ8IXX5 376 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 ASXL3Q9C0F0 2248 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 M0R1W7 72 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 RAMP3O60896 148 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 IGHG3P01860 377 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 CD7P09564 240 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 IGHV1-8P0DP01 117 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 GCSAMLQ5JQS6 135 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 ZNF319Q9P2F9 582 aa6.4□□□□□ -1.39
TRIM2-201ENST00000338700 MAP1BP46821 2468 aaKnown RBP6.4□□□□□ -1.39
TRIM2-201ENST00000338700 J3QRE1 110 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 UBE2CO00762 179 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 BOD1L2Q8IYS8 172 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 SCGB3A1Q96QR1 104 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 RPUSD1Q9UJJ7 312 aaKnown RBP6.39□□□□□ -1.39
TRIM2-201ENST00000338700 A0A1B0GWJ7 208 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 ATP5G3P48201 142 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 FOXG1P55316 489 aaPredicted RBP6.39□□□□□ -1.39
TRIM2-201ENST00000338700 FAM71F2Q6NXP2 309 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 LHFPL4Q7Z7J7 247 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 TRGV11A0A075B6L2 103 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 TRAV9-1A0A075B6T8 112 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 TRAV21A0A0B4J279 112 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 PRB1P04280 392 aa6.39□□□□□ -1.39
TRIM2-201ENST00000338700 GAS1P54826 345 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms